Results 81 to 90 of about 8,821,447 (199)

Divergent 3D genome architecture of male germ cells across vertebrates

Nature Communications
The evolutionary plasticity of the three-dimensional (3D) genome organization in vertebrates, and its transmission through the germ line, is central to understanding genome function and evolution.
Laia Marín-Gual, Lucía Álvarez-González, Laura González-Rodelas, Fleur Coppen, Ashley M. Milton, Rachel J. O’Neill, Andrew J. Pask, Marilyn B. Renfree, Arthur Georges, Paul D. Waters, Aurora Ruiz-Herrera   +10 more
doaj   +1 more source

From 2D to 4D: a containerized workflow and browser to explore dynamic chromatin architecture

BMC Bioinformatics
Background Characterizing the physical organization of the genome is essential for understanding long-range gene regulation, chromatin compartmentalization, and epigenetic accessibility.
David H. Rogers, Cullen Roth, Cameron Tauxe, Jeannie T. Lee, Christina R. Steadman, Karissa Y. Sanbonmatsu, Anna Lappala, Shawn R. Starkenburg   +7 more
doaj   +1 more source

Node features of chromosome structure networks and their connections to genome annotation

Computational and Structural Biotechnology Journal
The 3D conformations of chromosomes can encode biological significance, and the implications of such structures have been increasingly appreciated recently.
Yingjie Xu, Priyojit Das, Rachel Patton McCord, Tongye Shen   +3 more
doaj   +1 more source

Viral Chromosome Conformation Capture (V3C) Assays for Identifying Trans-interaction Sites between Lytic Viruses and the Cellular Genome

Bio-Protocol, 2019
The folding mechanisms of the mammalian genome package our genetic material into the nucleus, and in doing so, dictate its appropriate replication and expression.
Kinjal Majumder, Maria Boftsi, David Pintel   +2 more
doaj   +1 more source

Acquisition, Modélisation, Préservation, Usages, ... des données 3D​: les challenges du Consortium 3D SHS

, 2020
"Le Consortium 3D SHS, labellisé en 2014 puis en 2018 par la TGIR Huma-Num, a pour vocation de fédérer les initiatives foisonnantes autour de la 3D pour les Sciences Humaines et Sociales pour définir des standards et des recommandations d'usage ainsi que
Consortium 3D SHS Team
core  

A Polymer Physics Investigation of the Architecture of the Murine Orthologue of the 7q11.23 Human Locus

Frontiers in Neuroscience, 2017
In the last decade, the developments of novel technologies, such as Hi-C or GAM methods, allowed to discover that chromosomes in the nucleus of mammalian cells have a complex spatial organization, encompassing the functional contacts between genes and ...
Andrea M. Chiariello, Andrea M. Chiariello, Andrea Esposito, Andrea Esposito, Andrea Esposito, Carlo Annunziatella, Carlo Annunziatella, Simona Bianco, Simona Bianco, Luca Fiorillo, Luca Fiorillo, Antonella Prisco, Mario Nicodemi, Mario Nicodemi, Mario Nicodemi   +14 more
doaj   +1 more source

Vocabulaire 3D - Lexique pour les Sciences Humaines et Sociales

, 2020
"Ce document est le résultat d’un effort continu pour permettre aux acteurs des SHS et ceux de la 3D d’interagir autour d’un vocabulaire commun. Ce lexique a pour but d’accompagner les différents livrables du consortium 3D.
Consortium 3D SHS Team
core  

Les rencontres du Consortium 3D SHS Création -Usage scientifique - Conservation des données 3D

, 2020
La multiplication des initiatives autour de la création, des usages et de la conservation des données 3D dans les sciences humaines et sociales montrent une réelle nécessité de se coordonner afin de définir des standards dans les usages, les ...
Consortium 3D SHS Team
core  

[Offres]DEV Soft Images 3D et datas

, 2021
La mission consiste à créer des outils logiciels permettant d'intégrer, d'automatiser et d'optimiser la chaîne de traitement et de visualisation de l'imagerie numérique 3D et RTI (reflectance transformation imaging) à destination des experts et de la ...
Consortium 3D SHS Team
core  

DataSheet_1_Development of Deletion Lines for Chromosome 3D of Bread Wheat.pdf

, 2020
The identification of genes of agronomic interest in bread wheat (Triticum aestivum L.) is hampered by its allopolyploid nature (2n = 6x = 42; AABBDD) and its very large genome, which is largely covered by transposable elements.
Jan Bartoš (94324), Radim Svačina (5816012), Pierre Sourdille (4729416), Takashi R. Endo (6647057), Miroslava Karafiátová (3434447), Magdaléna Malurová (8365221), Heïdi Serra (488603), Dominik Vítek (8365224)   +7 more
core   +1 more source