Results 31 to 40 of about 71,112 (230)
Use of the Accessory Genome for Characterization and Typing of Acinetobacter baumannii [PDF]
Journal of Clinical Microbiology, 2011 ABSTRACT Outbreak strains of Acinetobacter baumannii are highly clonal, and cross-infection investigations can be difficult. We sought targets based on AbaR resistance islands and on other genes found in some, but not all, sequenced isolates of A.
Jane F, Turton +2 more
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Pan-genome Analyses of 3 Strains of and Prediction of Polysaccharide and Terpenoid Genes
Natural Product Communications, 2021 Inonotus obliquus is a rare, edible and medicinal fungus that is widely used as a remedy for various diseases. Its main bioactive substances are polysaccharides and terpenoids.
Xiaofan Guo, Shouming Wang
doaj +1 more source
The extensive set of accessoryPseudomonas aeruginosagenomic components [PDF]
FEMS Microbiology Letters, 2014 Up to 20% of the chromosomal Pseudomonas aeruginosa DNA belong to the so-called accessory genome. Its elements are specific for subgroups or even single strains and are likely acquired by horizontal gene transfer (HGT). Similarities of the accessory genomic elements to DNA from other bacterial species, mainly the DNA of γ- and β-proteobacteria ...
Sarah Pohl +7 more
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BMC Bioinformatics, 2010 Background The pan-genome of a bacterial species consists of a core and an accessory gene pool. The accessory genome is thought to be an important source of genetic variability in bacterial populations and is gained through lateral gene transfer ...
Villegas Andre +7 more
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Pan-Genome Analysis Reveals Functional Divergences in Gut-Restricted Gilliamella and Snodgrassella
Bioengineering, 2022 Gilliamella and Snodgrassella, members of core gut microbiota in corbiculate bees, have high species diversity and adaptability to a wide range of hosts.
Zhengyi Zhang +3 more
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Comparative genomics of the core and accessory genomes of 48 Sinorhizobiumstrains comprising five genospecies [PDF]
Genome Biology, 2013 Abstract Background The sinorhizobia are amongst the most well studied members of nitrogen-fixing root nodule bacteria and contribute substantial amounts of fixed nitrogen to the biosphere. While the alfalfa symbiont Sinorhizobium meliloti RM 1021 was one of the first rhizobial strains to be completely ...
Sugawara, Masayuki +20 more
openaire +4 more sources
Pandora: nucleotide-resolution bacterial pan-genomics with reference graphs
Genome Biology, 2021 We present pandora, a novel pan-genome graph structure and algorithms for identifying variants across the full bacterial pan-genome. As much bacterial adaptability hinges on the accessory genome, methods which analyze SNPs in just the core genome have ...
Rachel M. Colquhoun +10 more
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Comparative Genomics Reveals the Core and Accessory Genomes of Streptomyces Species
Journal of Microbiology and Biotechnology, 2015 The development of rapid and efficient genome sequencing methods has enabled us to study the evolutionary background of bacterial genetic information. Here, we present comparative genomic analysis of 17 Streptomyces species, for which the genome has been completely sequenced, using the pan-genome approach.
Ji-Nu, Kim +5 more
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Frontiers in Agronomy, 2023 The growth and persistence of alfalfa (Medicago sativa), a perennial legume capable of producing high yields of high-quality forage, is reduced in moderately acidic soils.
Juan Hilario Cafiero +7 more
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BMC Microbiology, 2009 Background Bacterial genomes are mosaic structures composed of genes present in every strain of the same species (core genome), and genes present in some but not all strains of a species (accessory genome).
Silva Claudia +5 more
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