Results 81 to 90 of about 254,703 (199)

Methylation analysis revealed salicylic acid affects pearl millet defense through external cytosine DNA demethylation

open access: yesJournal of Plant Interactions, 2018
The cytosine DNA methylation and demethylation have a role in regulating plant responses to the environment by affecting the promoter regions of most plant defense-related genes through the CpG islands or the CCGG motifs.
Baba Ngom   +6 more
doaj   +1 more source

Use of MSAP markers to analyse the effects of salt stress on DNA methylation in rapeseed (Brassica napus var. oleifera).

open access: yesPLoS ONE, 2013
Excessive soil salinity is a major ecological and agronomical problem, the adverse effects of which are becoming a serious issue in regions where saline water is used for irrigation.
Gianpiero Marconi   +9 more
doaj   +1 more source

Genome-wide cytosine methylation estimates of 200 plants of Helleborus foetidus obtained by HPLC and Methylation Scoring of MSAP data

open access: yes, 2015
Genome-wide cytosine methylation estimates in young leaves of 200 plants of Helleborus foetidus obtained using HPLC and the percentage of cytosine methylation in CCGG sites obtained by Methylation Scoring of MSAP data.
Herrera, Carlos M.   +9 more
core   +1 more source

High-throughput sequencing of cytosine methylation in plant DNA. [PDF]

open access: yes, 2013
: Cytosine methylation is a significant and widespread regulatory factor in plant systems. Methods for the high-throughput sequencing of methylation have allowed a greatly improved characterisation of the methylome.
Thomas J Hardcastle
core   +3 more sources

Dynamic silencing of somatic L1 retrotransposon insertions reflects the developmental and cellular contexts of their genomic integration

open access: yesMobile DNA, 2017
Background The ongoing mobilization of mammalian transposable elements (TEs) contributes to natural genetic variation. To survey the epigenetic control and expression of reporter genes inserted by L1 retrotransposition in diverse cellular and genomic ...
Manoj Kannan   +9 more
doaj   +1 more source

Effects of Tet-induced oxidation products of 5-methylcytosine on Dnmt1- and DNMT3a-mediated cytosine methylation [PDF]

open access: yes, 2014
We investigated systematically the effects of Tet-induced oxidation products of 5-methylcytosine on Dnmt1- and DNMT3a-mediated cytosine methylation in synthetic duplex DNA.
Lin, Krystal   +3 more
core   +1 more source

DNMT1 determines osteosarcoma cell resistance to apoptosis by associatively modulating DNA and mRNA cytosine-5 methylation

open access: yes, 2023
Supplementary tables for the research article entitled 'DNMT1 determines osteosarcoma cell resistance to apoptosis by associatively modulating DNA and mRNA cytosine-5 ...
hao tang
core   +1 more source

DNA methylation directs genomic localization of Mbd2 and Mbd3 in embryonic stem cells

open access: yeseLife, 2016
Cytosine methylation is an epigenetic and regulatory mark that functions in part through recruitment of chromatin remodeling complexes containing methyl-CpG binding domain (MBD) proteins.
Sarah J Hainer   +6 more
doaj   +1 more source

BSMAP: whole genome bisulfite sequence MAPping program

open access: yesBMC Bioinformatics, 2009
Background Bisulfite sequencing is a powerful technique to study DNA cytosine methylation. Bisulfite treatment followed by PCR amplification specifically converts unmethylated cytosines to thymine.
Li Wei, Xi Yuanxin
doaj   +1 more source

Bisulfighter: accurate detection of methylated cytosines and differentially methylated regions

open access: yesNucleic Acids Research, 2014
Abstract Analysis of bisulfite sequencing data usually requires two tasks: to call methylated cytosines (mCs) in a sample, and to detect differentially methylated regions (DMRs) between paired samples. Although numerous tools have been proposed for mC calling, methods for DMR detection have been largely limited.
Saito, Yutaka   +2 more
openaire   +3 more sources

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