Results 31 to 40 of about 453,721 (346)
BioWarehouse: a bioinformatics database warehouse toolkit
BMC Bioinformatics, 2006 Background This article addresses the problem of interoperation of heterogeneous bioinformatics databases. Results We introduce BioWarehouse, an open source toolkit for constructing bioinformatics database warehouses using the MySQL and Oracle relational
Stringer-Calvert David WJ +6 more
doaj +1 more source
RTPrimerDB : the portal for real-time PCR primers and probes [PDF]
, 2009 RTPrimerDB (http://www.rtprimerdb.org) is a freely accessible database and analysis tool for real-time quantitative PCR assays. RTPrimerDB includes records with user submitted assays that are linked to genome information from reference databases and ...
S. Lefever +7 more
core +2 more sources
EcoCyc: fusing model organism databases with systems biology. [PDF]
, 2012 EcoCyc (http://EcoCyc.org) is a model organism database built on the genome sequence of Escherichia coli K-12 MG1655. Expert manual curation of the functions of individual E.
Bonavides-Martínez, César +23 more
core +1 more source
NAPP: the Nucleic Acid Phylogenetic Profile Database [PDF]
Nucleic Acids Research, 2011 Nucleic acid phylogenetic profiling (NAPP) classifies coding and non-coding sequences in a genome according to their pattern of conservation across other genomes. This procedure efficiently distinguishes clusters of functional non-coding elements in bacteria, particularly small RNAs and cis-regulatory RNAs, from other conserved sequences.
Alban Ott +3 more
openaire +5 more sources
The 2024 Nucleic Acids Research database issue and the online molecular biology database collection
Nucleic Acids Research, 2023 The 2024 Nucleic Acids Research database issue contains 180 papers from across biology and neighbouring disciplines. There are 90 papers reporting on new databases and 83 updates from resources previously published in the Issue.
D. Rigden, Xosé M. Fernández
semanticscholar +1 more source
NPIDB: nucleic acid—protein interaction database [PDF]
Nucleic Acids Research, 2012 The Nucleic acid-Protein Interaction DataBase (http://npidb.belozersky.msu.ru/) contains information derived from structures of DNA-protein and RNA-protein complexes extracted from the Protein Data Bank (3846 complexes in October 2012). It provides a web interface and a set of tools for extracting biologically meaningful characteristics of ...
Dmitry D. Kirsanov +5 more
openaire +2 more sources
NACDDB: Nucleic Acid Circular Dichroism Database
Nucleic Acids Research, 2022 Abstract The Nucleic Acid Circular Dichroism Database (NACDDB) is a public repository that archives and freely distributes circular dichroism (CD) and synchrotron radiation CD (SRCD) spectral data about nucleic acids, and the associated experimental metadata, structural models, and links to literature.
Andrea Cappannini +7 more
openaire +3 more sources
The 2023 Nucleic Acids Research Database Issue and the online molecular biology database collection
Nucleic Acids Res., 2023 The 2023 Nucleic Acids Research Database Issue contains 178 papers ranging across biology and related fields. There are 90 papers reporting on new databases and 82 updates from resources previously published in the Issue. Six more papers are updates from
D. Rigden, Xosé M. Fernández
semanticscholar +1 more source
NucBase, an easy to use read mapper for small RNAs
Mobile DNA, 2013 Background High-throughput deep-sequencing technology has generated an unprecedented number of expressed sequence reads that offer the opportunity to get insight into biological systems.
Dufourt Jeremy +4 more
doaj +1 more source
Frontiers in Endocrinology, 2022 BackgroundOne-step nucleic acid amplification (OSNA) analysis is a molecular diagnostic technique for lymph node metastases (LNMs) by quantifying cytokeratin 19(CK 19) mRNA. We aim to evaluate the intraoperative diagnostic accuracy of OSNA assay for LNMs
Xiaofei Wang +4 more
doaj +1 more source