Results 21 to 30 of about 874,379 (256)
Rescaled range and transition matrix analysis of DNA sequences [PDF]
, 1999 In this paper we treat some fractal and statistical features of the DNA sequences. First, a fractal record model of DNA sequence is proposed by mapping DNA sequences to integer sequences, followed by R/S analysis of the model and computation of the Hurst
Chen, Guo-Yi, Yu, Zu-Guo
core +3 more sources
Towards precision quantification of contamination in metagenomic sequencing experiments
Microbiome, 2019 Metagenomic next-generation sequencing (mNGS) experiments involving small amounts of nucleic acid input are highly susceptible to erroneous conclusions resulting from unintentional sequencing of occult contaminants, especially those derived from ...
M. S. Zinter +4 more
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A computational method for estimating the PCR duplication rate in DNA and RNA-seq experiments. [PDF]
, 2017 BackgroundPCR amplification is an important step in the preparation of DNA sequencing libraries prior to high-throughput sequencing. PCR amplification introduces redundant reads in the sequence data and estimating the PCR duplication rate is important to
Bansal, Vikas
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Review on the Application of Machine Learning Algorithms in the Sequence Data Mining of DNA
Frontiers in Bioengineering and Biotechnology, 2020 Deoxyribonucleic acid (DNA) is a biological macromolecule. Its main function is information storage. At present, the advancement of sequencing technology had caused DNA sequence data to grow at an explosive rate, which has also pushed the study of DNA ...
Aimin Yang +5 more
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Detection and characterization of tomato leaf curl New Delhi virus association with mosaic disease of ivy gourd (Coccinia grandis (L.) Voigt) in North India [PDF]
Archives of Biological Sciences, 2018 Sixteen ivy gourd (Coccinia grandis (L.) Voigt) plant samples showing severe mosaic symptoms were collected from New Delhi and Varanasi (Uttar Pradesh) in India. Begomovirus infection was confirmed by PCR using begomovirusspecific primers.
Venkataravanappa Venkataravanappa +4 more
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BioLink, 2021 To understand the fundamental mechanisms on genes in plant cells can be performed by gene expression studies. The study needs reference genes that act as internal control to avoid expression data bias.
Putri Agustina, Dewi Indriyani Roslim
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Google Matrix Analysis of DNA Sequences
PLoS ONE, 2013 latex, 11 ...
Kandiah, Vivek, Shepelyansky, Dima
openaire +5 more sources
Mapping the Space of Genomic Signatures [PDF]
, 2014 We propose a computational method to measure and visualize interrelationships among any number of DNA sequences allowing, for example, the examination of hundreds or thousands of complete mitochondrial genomes.
Bryans, Nathaniel +6 more
core +4 more sources
Genomic analysis of sequence-dependent DNA curvature in Leishmania. [PDF]
PLoS ONE, 2013 Leishmania major is a flagellated protozoan parasite of medical importance. Like other members of the Trypanosomatidae family, it possesses unique mechanisms of gene expression such as constitutive polycistronic transcription of directional gene clusters,
Pablo Smircich +3 more
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Microorganisms, 2022 Precise classification of bacteria facilitates prediction of their ecological niche. The genus Enterobacter includes pathogens of plants and animals but also beneficial bacteria that may require reclassification.
Ge Gao +8 more
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