Results 31 to 40 of about 208,264 (275)
Tissue resolved, gene structure refined equine transcriptome. [PDF]
, 2017 BackgroundTranscriptome interpretation relies on a good-quality reference transcriptome for accurate quantification of gene expression as well as functional analysis of genetic variants.
Bellone, RR +9 more
core +1 more source
Bacterial riboproteogenomics : the era of N-terminal proteoform existence revealed [PDF]
, 2020 With the rapid increase in the number of sequenced prokaryotic genomes, relying on automated gene annotation became a necessity. Multiple lines of evidence, however, suggest that current bacterial genome annotations may contain inconsistencies and are ...
Fijalkowska, Daria +3 more
core +2 more sources
Frontiers in Genetics, 2014 With the advancement of new high throughput sequencing technologies, there has been an increase in the number of genome sequencing projects worldwide, which has yielded complete genome sequences of human, animals and plants.
Gaston K Mazandu, Nicola eMulder
doaj +1 more source
Liftoff: accurate mapping of gene annotations [PDF]
Bioinformatics, 2021 Abstract Motivation Improvements in DNA sequencing technology and computational methods have led to a substantial increase in the creation of high-quality genome assemblies of many species. To understand the biology of these genomes, annotation of gene features and other functional elements is ...
Alaina Shumate, Steven L Salzberg
openaire +3 more sources
Gene coexpression network analysis as a source of functional annotation for rice genes. [PDF]
PLoS ONE, 2011 With the existence of large publicly available plant gene expression data sets, many groups have undertaken data analyses to construct gene coexpression networks and functionally annotate genes.
Kevin L Childs +2 more
doaj +1 more source
Annotation Enrichment Analysis: An Alternative Method for Evaluating the Functional Properties of Gene Sets [PDF]
, 2013 Gene annotation databases (compendiums maintained by the scientific community that describe the biological functions performed by individual genes) are commonly used to evaluate the functional properties of experimentally derived gene sets.
Girvan, Michelle, Glass, Kimberly
core +2 more sources
FusionGDB: fusion gene annotation DataBase [PDF]
Nucleic Acids Research, 2018 Gene fusion is one of the hallmarks of cancer genome via chromosomal rearrangement initiated by DNA double-strand breakage. To date, many fusion genes (FGs) have been established as important biomarkers and therapeutic targets in multiple cancer types.
Xiaobo Zhou, Pora Kim
openaire +3 more sources
Non‐homology‐based prediction of gene functions in maize (Zea mays ssp. mays)
The Plant Genome, 2020 Advances in genome sequencing and annotation have eased the difficulty of identifying new gene sequences. Predicting the functions of these newly identified genes remains challenging.
Xiuru Dai +6 more
doaj +1 more source
Chromosome-level genome assembly of Fragaria pentaphylla using PacBio and Hi-C technologies
Frontiers in Genetics, 2022 Fragaria pentaphylla, a wild diploid quinquefoliolate species of Fragaria, is native to Southwest China. It has two morphs of red and white fruit color in nature and has characteristics of unique fragrance and resistance, which made it not only a ...
Rui Sun +32 more
doaj +1 more source
Direct submission system and literature annotation of rice genes in Oryzabase [PDF]
, 2009 Oryzabase ("http://www.shigen.nig.ac.jp/rice/oryzabase/":http://www.shigen.nig.ac.jp/rice/oryzabase/) is a comprehensive rice science database ^1^.
Rie Tsuchiya +4 more
core +2 more sources