Results 41 to 50 of about 208,264 (275)
Gene Ontology Meta Annotator for Plants (GOMAP) [PDF]
Plant Methods, 2019 AbstractAnnotating gene structures and functions to genome assemblies is necessary to make assembly resources useful for biological inference. Gene Ontology (GO) term assignment is the most used functional annotation system, and new methods for GO assignment have improved the quality of GO-based function predictions.
Wimalanathan, Kokulapalan +1 more
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EuCAP, a Eukaryotic Community Annotation Package, and its application to the rice genome
BMC Genomics, 2007 Background Despite the improvements of tools for automated annotation of genome sequences, manual curation at the structural and functional level can provide an increased level of refinement to genome annotation.
Hamilton John P +4 more
doaj +1 more source
Global Heart, 2021 Background: The etiology of pulmonary arterial hypertension (PAH) in the Han Chinese population is poorly understood. Objectives: The aim of this study was to assess gene variants and associated functional annotations for PAH in Han Chinese patients ...
Mei-Tzu Wang +5 more
doaj +1 more source
PrismEXP: gene annotation prediction from stratified gene-gene co-expression matrices [PDF]
PeerJ, 2023 Background Gene-gene co-expression correlations measured by mRNA-sequencing (RNA-seq) can be used to predict gene annotations based on the co-variance structure within these data.
Alexander Lachmann +5 more
doaj +2 more sources
Frontiers in Microbiology, 2022 Many pathways for hydrocarbon degradation have been discovered, yet there are no dedicated tools to identify and predict the hydrocarbon degradation potential of microbial genomes and metagenomes.
Varada Khot +11 more
doaj +1 more source
Using the Gene Ontology to Annotate Biomedical Journal Articles [PDF]
, 2009 We are creating a gold-standard corpus of manually annotated full-text biomedical journal articles toward natural-language-processing applications. Central to this is our use of entire ontologies of the Open Biomedical Ontologies initiative as well as ...
Lawrence Hunter, Michael Bada
core +2 more sources
On gene ontology and function annotation [PDF]
Bioinformation, 2006 The effort of function annotation does not merely involve associating a gene with some structured vocabulary that describes action. Rather the details of the actions, the components of the actions, the larger context of the actions are important issues that are of direct relevance, because they help understand the biological system to which the gene ...
openaire +3 more sources
GoGene: gene annotation in the fast lane [PDF]
Nucleic Acids Research, 2009 High-throughput screens such as microarrays and RNAi screens produce huge amounts of data. They typically result in hundreds of genes, which are often further explored and clustered via enriched GeneOntology terms. The strength of such analyses is that they build on high-quality manual annotations provided with the GeneOntology.
Michael Schroeder +4 more
openaire +3 more sources
Annotation extension through protein family annotation coherence metrics
Frontiers in Genetics, 2013 Protein functional annotation consists in associating proteins with textual descriptors elucidating their biological roles. The bulk of annotation is done via automated procedures that ultimately rely on annotation transfer.
Hugo Paulo Bastos +2 more
doaj +1 more source
Evaluating Computational Gene Ontology Annotations [PDF]
, 2016 ISBN:978-1-4939-3743 ...
Richard J. Roberts +4 more
openaire +4 more sources