Results 41 to 50 of about 7,510,778 (382)

KEGG as a reference resource for gene and protein annotation

open access: yesNucleic Acids Res., 2015
KEGG (http://www.kegg.jp/ or http://www.genome.jp/kegg/) is an integrated database resource for biological interpretation of genome sequences and other high-throughput data.
M. Kanehisa   +4 more
semanticscholar   +1 more source

Liftoff: an accurate gene annotation mapping tool

open access: yesbioRxiv, 2020
Improvements in DNA sequencing technology and computational methods have led to a substantial increase in the creation of high-quality genome assemblies of many species.
Alaina Shumate, S. Salzberg
semanticscholar   +1 more source

ANNOTATING GENES USING TEXTUAL PATTERNS [PDF]

open access: yesBiocomputing 2007, 2006
Annotating genes with Gene Ontology (GO) terms is crucial for biologists to characterize the traits of genes in a standardized way. However, manual curation of textual data, the most reliable form of gene annotation by GO terms, requires significant amounts of human effort, is very costly, and cannot catch up with the rate of increase in biomedical ...
Ali, Cakmak, Gultekin, Ozsoyoglu
openaire   +2 more sources

Functional genome Annotation in Bacterial infections: A Review [PDF]

open access: yesAl Ameen Journal of Medical Sciences, 2021
Functional annotation provides the information of gene about its biological identity and various types of molecular function and biological role like sub-cellular location and its expression.
Sharique Ahmad   +3 more
doaj  

Tissue resolved, gene structure refined equine transcriptome. [PDF]

open access: yes, 2017
BackgroundTranscriptome interpretation relies on a good-quality reference transcriptome for accurate quantification of gene expression as well as functional analysis of genetic variants.
Bellone, RR   +9 more
core   +1 more source

The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools

open access: yesNucleic Acids Res., 2011
The Arabidopsis Information Resource (TAIR, http://arabidopsis.org) is a genome database for Arabidopsis thaliana, an important reference organism for many fundamental aspects of biology as well as basic and applied plant biology research. TAIR serves as
Philippe Lamesch   +16 more
semanticscholar   +1 more source

Improved annotation of 3' untranslated regions and complex loci by combination of strand-specific direct RNA sequencing, RNA-seq and ESTs [PDF]

open access: yes, 2013
The reference annotations made for a genome sequence provide the framework for all subsequent analyses of the genome. Correct annotation is particularly important when interpreting the results of RNA-seq experiments where short sequence reads are mapped ...
A Derti   +52 more
core   +9 more sources

A curated catalog of canine and equine keratin genes. [PDF]

open access: yesPLoS ONE, 2017
Keratins represent a large protein family with essential structural and functional roles in epithelial cells of skin, hair follicles, and other organs. During evolution the genes encoding keratins have undergone multiple rounds of duplication and humans ...
Pierre Balmer   +9 more
doaj   +1 more source

Annotation Enrichment Analysis: An Alternative Method for Evaluating the Functional Properties of Gene Sets [PDF]

open access: yes, 2013
Gene annotation databases (compendiums maintained by the scientific community that describe the biological functions performed by individual genes) are commonly used to evaluate the functional properties of experimentally derived gene sets.
Girvan, Michelle, Glass, Kimberly
core   +2 more sources

Human gene correlation analysis (HGCA): A tool for the identification of transcriptionally co-expressed genes

open access: yesBMC Research Notes, 2012
Background Bioinformatics and high-throughput technologies such as microarray studies allow the measure of the expression levels of large numbers of genes simultaneously, thus helping us to understand the molecular mechanisms of various biological ...
Michalopoulos Ioannis   +6 more
doaj   +1 more source

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