Results 71 to 80 of about 37,620 (216)

AGMIAL: implementing an annotation strategy for prokaryote genomes as a distributed system

, 2006
We have implemented a genome annotation system for prokaryotes called AGMIAL. Our approach embodies a number of key principles. First, expert manual annotators are seen as a critical component of the overall system; user interfaces were cyclically ...
Loux, Valentin, S. Chaillou, Hoebeke, Mark,, Maguin, Emmanuelle, K. Bryson, Loux, V., Chaillou, Stéphane, Bessières, P., Bessières, Philippe, Chaillou, Stephane,, Gibrat, J.-F., M. Van De Guchte, Chaillou, S., Gibrat, Jean-François, Hoebeke, M., Penaud, Stéphanie, van de Guchte, M., van de Guchte, Maarten,, Maguin, E., E. Maguin, Penaud, S., P. Nicolas, M. Hoebeke, van de Guchte, Maarten, Bossy, Robert,, Bryson, K., S. Penaud, V. Loux, Bossy, R., Bossy, Robert, R., R. Bossy, Hoebeke, Mark, J-f Gibrat, Nicolas, P.   +33 more
core   +1 more source

High-throughput proteogenomics of Ruegeria pomeroyi: seeding a better genomic annotation for the whole marine Roseobacter clade [PDF]

, 2012
Background The structural and functional annotation of genomes is now heavily based on data obtained using automated pipeline systems. The key for an accurate structural annotation consists of blending similarities between closely related genomes with ...
Christie-Oleza Joseph A, Miotello, Guylaine, Joseph A Christie-Oleza, Jean Armengaud, Armengaud, J., Armengaud, Jean, Guylaine Miotello, Miotello Guylaine, Christie-Oleza, Joseph Alexander, Armengaud Jean, Christie-Oleza, Joseph A   +10 more
core   +1 more source

Re-annotation is an essential step in systems biology modeling of functional genomics data. [PDF]

PLoS ONE, 2010
One motivation of systems biology research is to understand gene functions and interactions from functional genomics data such as that derived from microarrays.
Bart H J van den Berg, Fiona M McCarthy, Susan J Lamont, Shane C Burgess   +3 more
doaj   +1 more source

Therapeutic Apheresis in Nigeria: A Multi‐Center Summary of Abstracts From the Inaugural Nigerian Society for Apheresis Scientific Meeting

Therapeutic Apheresis and Dialysis, EarlyView.
ABSTRACT Background Therapeutic apheresis (TA) is an established treatment modality for hematologic, neurologic, and immunologic disorders, yet access remains severely limited in sub‐Saharan Africa. Donor apheresis, including platelet apheresis collection from healthy donors, represents an important complementary modality supporting blood product ...
Nosa Bazuaye, Chimezie Okwuonu, Evelyn Idam, Folasade Adelekan‐Popoola, Shakirat Gold‐Olufadi, Olufunto Olufela Kalejaiye, Abdullateef Ogala, Zinnah Aloziem, Blossom Amamchukwu, Patience Elimia, Mkpoikanabasi Obot‐Obot, Henry Mbakwe, Praises Maduagwuna, Olatunji Akinrodoye, Chiamaka Anyanwu, Benjamin Anyanwu, Adedamola Akinsiku, Oluwatoyin A. Akinsiku, Muzamil O. Hassan, Fatiu A. Arogundade, Olalekan E. Ojo, Homayemem Weli, Jesupelumi Adenihun, Aderemi Adelaja, Ebun Bamgboye, Olalekan Olatise, Ade E. Faponle, Ayoola Odeyemi, Michael Muoka, Stephen Asaolu, Qudrat Busari, Blessing Dawudu, Michael Naiyeju, Rasheed A. Balogun   +33 more
wiley   +1 more source

GenDB - an open source genome annotation system for prokaryote genomes

, 2003
Meyer F, Goesmann A, McHardy AC, et al. GenDB - an open source genome annotation system for prokaryote genomes. Nucleic Acids Research.
Rupp, Oliver, Bartels, Daniela, Linke, Burkhard, McHardy, Alice C., Goesmann, Alexander ; https://orcid.org/, Bekel, Thomas, Kalinowski, Jörn, Giegerich, Robert, Pühler, Alfred ; https://orcid.org/, Meyer, Folker, Clausen, Jörn   +10 more
core   +1 more source

Consensus clustering and functional interpretation of gene-expression data [PDF]

, 2004
Microarray analysis using clustering algorithms can suffer from lack of inter-method consistency in assigning related gene-expression profiles to clusters.
Liu, X, Orengo, Christine, Martin, N, Kellam, P., Paul Kellam, Liu, X., Swift, Stephen, Swift, S, Orengo, C.A., Tucker, Allan, Tucker, A., Tucker, A, Liu, XH, Allan Tucker, Vinciotti, Veronica, Christine Orengo, Veronica Vinciotti, Vinciotti, V., Xiaohui Liu, Swift, S., Kellam, P, Liu, Xiaohui, Vinciotti, V, Stephen Swift, Kellam, Paul, Orengo, C, Martin, Nigel, Nigel Martin   +27 more
core   +1 more source

Reciprocal control of viral infection and phosphoinositide dynamics

FEBS Letters, EarlyView.
Phosphoinositides, although scarce, regulate key cellular processes, including membrane dynamics and signaling. Viruses exploit these lipids to support their entry, replication, assembly, and egress. The central role of phosphoinositides in infection highlights phosphoinositide metabolism as a promising antiviral target.
Marie Déborah Bancilhon, Bruno Mesmin
wiley   +1 more source

In silico Gene Characterization and biological annotation of Aspergillus niger CBS 513.88

, 2011
Genome annotation is the process of estimation of biological features from genomic data. The target of a genome annotation is to identify the key features of the genome sequence particularly, the genes and gene products.
Anuraj Nayarisseri, Rajesh Patidar, Rajesh Patidar, Mukesh Yadav, Mayura Maynal, Vini Lokhande, Anuraj Nayarisseri, Mayura Maynal   +7 more
core   +1 more source

Gene ontology annotation resources.

, 2022
Gene ontology annotation resources.
Christopher T. Workman (10053), Christian Degnbol Madsen (12908665), Jotun Hein (27177)   +2 more
core   +1 more source

ARMOUR – A Rice miRNA: mRNA Interaction Resource

Frontiers in Plant Science, 2018
ARMOUR was developed as ARice miRNA:mRNA interaction resource. This informative and interactive database includes the experimentally validated expression profiles of miRNAs under different developmental and abiotic stress conditions across seven Indian ...
Neeti Sanan-Mishra, Anita Tripathi, Kavita Goswami, Rohit N. Shukla, Madavan Vasudevan, Hitesh Goswami   +5 more
doaj   +1 more source