Results 31 to 40 of about 786,474 (343)

Gene regulatory networks for development [PDF]

open access: yesProceedings of the National Academy of Sciences, 2005
The genomic program for development operates primarily by the regulated expression of genes encoding transcription factors and components of cell signaling pathways. This program is executed by cis-regulatory DNAs (e.g., enhancers and silencers) that control gene expression.
Levine, Michael, Davidson, Eric H.
openaire   +3 more sources

Literature-based priors for gene regulatory networks [PDF]

open access: yes, 2009
Motivation: The use of prior knowledge to improve gene regulatory network modelling has often been proposed. In this paper we present the first research on the massive incorporation of prior knowledge from literature for Bayesian network learning of gene
't Hoen, PAC   +3 more
core   +2 more sources

Model Checking Gene Regulatory Networks [PDF]

open access: yes, 2015
19 pages, 20 references, 4 ...
Mirco Giacobbe   +5 more
openaire   +3 more sources

Approximate kernel reconstruction for time-varying networks

open access: yesBioData Mining, 2019
Background Most existing algorithms for modeling and analyzing molecular networks assume a static or time-invariant network topology. Such view, however, does not render the temporal evolution of the underlying biological process as molecular networks ...
Gregory Ditzler   +3 more
doaj   +1 more source

Gene autoregulation via intronic microRNAs and its functions [PDF]

open access: yes, 2012
Background: MicroRNAs, post-transcriptional repressors of gene expression, play a pivotal role in gene regulatory networks. They are involved in core cellular processes and their dysregulation is associated to a broad range of human diseases.
Baroudi, Mariama El   +4 more
core   +2 more sources

Gene regulatory network subcircuit controlling a dynamic spatial pattern of signaling in the sea urchin embryo [PDF]

open access: yes, 2008
We dissect the transcriptional regulatory relationships coordinating the dynamic expression patterns of two signaling genes, wnt8 and delta, which are central to specification of the sea urchin embryo endomesoderm.
Alifragis   +34 more
core   +3 more sources

Understanding Tissue-Specific Gene Regulation

open access: yesCell Reports, 2017
Summary: Although all human tissues carry out common processes, tissues are distinguished by gene expression patterns, implying that distinct regulatory programs control tissue specificity.
Abhijeet Rajendra Sonawane   +9 more
doaj   +1 more source

Artificial Gene Regulatory Networks—A Review [PDF]

open access: yesArtificial Life, 2019
In nature, gene regulatory networks are a key mediator between the information stored in the DNA of living organisms (their genotype) and the structural and behavioral expression this finds in their bodies, surviving in the world (their phenotype). They integrate environmental signals, steer development, buffer stochasticity, and allow evolution to ...
Cussat-Blanc, Sylvain   +2 more
openaire   +4 more sources

Calculating Biological Behaviors of Epigenetic States in Phage lambda Life Cycle [PDF]

open access: yes, 2004
Gene regulatory network of lambda phage is one the best studied model systems in molecular biology. More 50 years of experimental study has provided a tremendous amount of data at all levels: physics, chemistry, DNA, protein, and function.
Ao, P., Hood, L., Yin, L., Zhu, X. -M.
core   +1 more source

Variable levels of drift in tunicate cardiopharyngeal gene regulatory elements

open access: yesEvoDevo, 2019
Background Mutations in gene regulatory networks often lead to genetic divergence without impacting gene expression or developmental patterning. The rules governing this process of developmental systems drift, including the variable impact of selective ...
William Colgan   +25 more
doaj   +1 more source

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