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Biochemical techniques for genotype characterization

1990
The techniques mainly used for genotype identification and characterization are presented and discussed in respect to their suitability and performance. Procedures are described for distinguishing between varieties and wild types of oats (Avena spp.) as well as varieties and provenances of Jerusalem artichoke (Helianthus tuberosus L.) using ...
G. F. Rühl, K.-H. Standke, K. Marmulla
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Molecular Biology Techniques for the Identification and Genotyping of Microorganisms

2019
The advent in molecular biology techniques has enabled, to a great extent, numerous identification and detection techniques of microorganisms by amplifying specific conserved DNA sequences. From time-to-time, the tremendous modifications have been employed in search of a rapid and inexpensive microbial identification method and now a whole genome to be
Nisarg Gohil   +3 more
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Development of a novel genotype-specific loop-mediated isothermal amplification technique for Hepatitis B virus genotypes B and C genotyping and quantification

Journal of Clinical Virology, 2011
There is the need for a rapid, economical method for genotyping Hepatitis B virus (HBV) to support clinical practice.To develop a novel HBV genotyping process using genotype specific loop mediated isothermal amplification (LAMP).HBV genotypes B and C specific LAMP methods were evaluated using standard panel.
Zhejun, Cai   +4 more
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[A simple technique for the genotyping of TH01 locus].

Nihon hoigaku zasshi = The Japanese journal of legal medicine, 1998
It is difficult to differentiate between type 9.3 and 10 at the TH01 locus. Therefore, we designed three primers including allele-specific primer for the type 9.3. Our primer sets gave shorter fragments ranging from 62 to 81 bp than those in other reports, allowing each allelic band to be resolved by 10% non-denaturing polyacrylamide gel ...
K, Umetsu   +3 more
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Genotyping with a dried blood spot method: A useful technique for application in pharmacogenetics

Clinica Chimica Acta, 2008
Several commercial DNA isolation kits are available for extracting the genomic DNA from the ethylene diamine tetra-acetic acid (EDTA) whole blood samples. To obtain DNA from whole blood these DNA isolation procedures require quite some hands on time and are rather expensive.
Wijnen, P.A.H.M.   +9 more
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Pyrosequencing genotype storage techniques.

Methods in molecular biology (Clifton, N.J.), 2007
Data storage and data coordination are important aspects of project design and execution. Pyrosequencing technology allows thousands of data-points to be collected per day. Consequently, a consistent and reliable method of data input and storage is vital. This chapter discusses the strengths and weaknesses of data storage systems.
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PCR-CTPP: a new genotyping technique in the era of genetic epidemiology

Expert Review of Molecular Diagnostics, 2001
A new PCR method, PCR-CTPP (polymerase chain reaction with confronting two-pair primers) was invented to genotype a relatively large number of samples in a cost-effective and time-saving manner. In this method, allele-specific DNA products are amplified by means of applying appropriately designed two-pair primers (four primers) into an ordinary PCR ...
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Optimization and Application of Genotyping and Identification Techniques for Pneumocystis jirovecii

2022
Pneumocystis species are obligate fungi capable of causing opportunistic infection called Pneumocystis Pneumonia (PCP) in those who are immunocompromised, often resulting in serious disease and a high mortality rate. Due to host specificity and inability to conduct in vitro studies, molecular methods have stepped in to undertake the bulk of ...
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Non-gel based techniques for plant pathogen genotyping.

Acta microbiologica Polonica, 2004
The introduction of real-time PCR technology has significantly improved and simplified the quantification of nucleic acids, and this technology has become an invaluable tool for many scientists working in different disciplines. Particularly in the field of molecular diagnostics and genotyping, real-time PCR-based assays have gained favour in the recent
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