Automated SNP genotype clustering algorithm to improve data completeness in high-throughput SNP genotyping datasets from custom arrays [PDF]
, 2007 High-throughput SNP genotyping platforms use automated genotype calling algorithms to assign genotypes. While these algorithms work efficiently for individual platforms, they are not compatible with other platforms, and have individual biases that result
Smith, Edward M. +3 more
core +1 more source
Characterization of Mertk Mutation and Development of A Polymerase Chain Reaction Genotyping Method in Royal College of Surgeons Rats [PDF]
Cell JournalThe retinal pigment epithelium (RPE) cells are a single layer of cells with specific functions in vision. The Mertkgene, encoding a receptor tyrosine kinase, is critical for the phagocytic function of retinal RPE cells.
Mahdi Hesaraki +5 more
doaj +1 more source
Validation of a Polymerase Chain Reaction technique for Kidd blood group genotyping [PDF]
, 2015 The Kidd blood group antigens, Jkª and Jkᵇ , are two of the main surface markers which are found on the membrane of red blood cells. The determination of whether a donor or a recipient has the Jkª and/or the Jkᵇ antigens is crucially important to ...
Xuereb, Karl +2 more
core +1 more source
Application of high-resolution DNA melting for genotyping in lepidopteran non-model species: Ostrinia furnacalis (Crambidae). [PDF]
PLoS ONE, 2012 Development of an ideal marker system facilitates a better understanding of the genetic diversity in lepidopteran non-model organisms, which have abundant species, but relatively limited genomic resources.
FengBo Li +3 more
doaj +1 more source
Non-invasive fetal RHD genotyping tests : a systematic review of the quality of reporting of diagnostic accuracy in published studies [PDF]
, 2009 Articles reporting the diagnostic accuracy of non-invasive prenatal diagnostic (NIPD) tests for RHD genotyping using fetal material extracted from maternal blood have been published steadily for over a decade. Health care providers in Europe have started
Szczepura, Ala +5 more
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Informatics in Medicine Unlocked, 2021 A genome-wide association study (GWAS) is a standard population-based technique for identifying the heritable genetic basis of complex diseases by discovering correlations between trait variations and allele frequencies of genetic markers.
Zahra Mortezaei, Mahmood Tavallaei
doaj +1 more source
Evaluation of customised lineage-specific sets of MIRU-VNTR loci for genotyping Mycobacterium tuberculosis complex isolates in Ghana [PDF]
, 2014 Different combinations of variable number of tandem repeat (VNTR) loci have been proposed for genotyping Mycobacterium tuberculosis complex (MTBC). Existing VNTR schemes show different discriminatory capacity among the six human MTBC lineages.
Michael Selasi Nyaho (542676) +17 more
core +1 more source
High Frequency of Chlamydia trachomatis Mixed Infections Detected by Microarray Assay in South American Samples. [PDF]
PLoS ONE, 2016 Chlamydia trachomatis is one of the most common sexually transmitted infections worldwide. Based on sequence variation in the ompA gene encoding the major outer membrane protein, the genotyping scheme distinguishes 17 recognized genotypes, i.e. A, B, Ba,
Lucía Gallo Vaulet +7 more
doaj +1 more source
Comparison of single nucleotide polymorphisms and microsatellites in non-invasive genetic monitoring of a wolf population [PDF]
Archives of Biological Sciences, 2012 Single nucleotide polymorphisms (SNPs) which represent the most widespread source of sequence variation in genomes, are becoming a routine application in several fields such as forensics, ecology and conservation genetics.
Fabbri Elena +7 more
doaj +1 more source
The application of genotyping techniques to the epidemiological analysis ofCampylobacter jejuni [PDF]
Epidemiology and Infection, 1996 SummaryCampylobacter jejuniserogroup reference strains and collections of sporadic and outbreak- associated isolates were examined for restriction fragment length polymorphisms (RFLPs), usingC. jejunirandom chromosomal and 16S rRNA gene probes. A collection of 48 Penner (HS) and 14 Lior (HL) serogroup reference strains, plus 10 clinical isolates ...
C J, Jackson +4 more
openaire +2 more sources