Results 121 to 130 of about 156,271 (269)

U'Ren et al. - ITS2 MiSeq reads

, 2019
Demultiplexed Illumina MiSeq R2 data (representing the ITS2 region) for each sample.
Jana U'Ren (6029645)
core   +1 more source

Diagnosis of bacteraemia in neonatal foals using 16S rRNA high‐throughput sequencing

Equine Veterinary Journal, EarlyView.
Abstract Background Sepsis is an important cause of morbidity and mortality in foals. Early diagnosis can improve outcome but is complicated by non‐specific clinical signs and delayed confirmation of infection via blood culture. Molecular assays represent a rapid and more sensitive alternative.
Flavie Payette, Alicia E. Long, Weiming Hu, Kyle Bittinger, Ahmed M. Moustafa, Darko Stefanovski, Michelle Abraham, Maia R. Aitken   +7 more
wiley   +1 more source

Understanding and mitigating some limitations of Illumina© MiSeq for environmental sequencing of Fungi

, 2017
ITS-amplicon metabarcode studies using the illumina MiSeq sequencing platform are the current standard tool for fungal ecology studies. Here we report on some of the particular challenges experienced while creating and using a ribosomal RNA gene (rDNA ...
Bitty Roy, Roo Vandegrift, Dan Thomas, Graham Bailes   +3 more
core   +1 more source

Qualitative and quantitative assessment of Illumina’s forensic STR and SNP kits on MiSeq FGx™

PLOS ONE, 2017
Massively parallel sequencing (MPS) is a powerful tool transforming DNA analysis in multiple fields ranging from medicine, to environmental science, to evolutionary biology. In forensic applications, MPS offers the ability to significantly increase the discriminatory power of human identification as well as aid in mixture deconvolution. However, before
Vishakha Sharma, Hoi Yan Chow, Donald Siegel, Elisa Wurmbach   +3 more
openaire   +4 more sources

Biochemical Mechanisms and Microorganisms Involved in Anaerobic Testosterone Metabolism in Estuarine Sediments

Frontiers in Microbiology, 2017
Current knowledge on the biochemical mechanisms underlying microbial steroid metabolism in anaerobic ecosystems is extremely limited. Sulfate, nitrate, and iron [Fe (III)] are common electron acceptors for anaerobes in estuarine sediments.
Chao-Jen Shih, Chao-Jen Shih, Yi-Lung Chen, Chia-Hsiang Wang, Sean T.-S. Wei, I-Ting Lin, Wael A. Ismail, Yin-Ru Chiang   +7 more
doaj   +1 more source

Microbial genome (Illumina MiSeq) sequencing of drinking water treatment residuals to evaluate compatibility with environmental applications. [PDF]

Environ Monit Assess, 2023
Turner T, Tonge D, Glanville HC, Wheeler R, Oliver IW.   +4 more
europepmc   +1 more source

Reducing Run-to-Run Carryover on the MiSeq Using Dilute Sodium Hypochlorite Solution

, 2018
Technical note from Illumina. Uploaded because of link-rot.
Illumina Inc. (5693716)
core   +1 more source

SARS-CoV-2 Illumina MiSeq protocol v.2 v2

, 2021
ARTIC amplicon sequencing protocol adapted from Josh Quick's https://www.protocols.io/view/ncov-2019-sequencing-protocol-v2-bdp7i5rn for illumina sequencing of SARS-CoV-2
openaire   +1 more source

Microbial metabolite indole‐3‐propionic acid preserves astrocytic mitochondrial mitofusin 2 to limit neuroinflammation after traumatic brain injury

Interdisciplinary Medicine, EarlyView.
Following traumatic brain injury, indole‐3‐propionic acid (IPA) directly targets the aryl hydrocarbon receptor on astrocytes in the peri‐lesional cortex; this suppresses interferon regulatory factor 1‐driven transcription of the E3 ubiquitin ligase RFFL (ring finger and FYVE‐like domain containing E3 ubiquitin protein ligase).
Ziwen Zhang, Kai Wang, Liangbo Wang, Wencong Li, Hao Guo, Meng Xu, Tinghao Wang, Jiahui Ren, Ting Zhu, Jiahui Wang, Wenxing Cui, Jinpeng Zhou, Yang Tian, Liying Han, Chengxuan Guo, Shuoyao Ma, Qiang Wang, Zhihong Li, Yaning Cai, Jingyu Dong, Xun Wu, Haixiao Liu, Yan Qu   +22 more
wiley   +1 more source

Analysis of the eight vaccine batches using whole genome sequencing with the Illumina MiSeq 2000 platform.

, 2015
Abbreviations: N, nucleoprotein; P, phosphoprotein; M, matrix protein.a) Data show the mean percentage of SADB19/SAG2 mutations for the first half of rabies genome by comparison with the SAD Bern genomic sequence (EF206708) which was used as a reference ...
Zita Muizniece (819324), Ingrida Jaceviciene (819325), Zuzana Dirbakova (819323), Florence Cliquet (331147), Vladimir Celer (819327), Marta Matulova (126441), Evelyne Picard-Meyer (331154), Franco Mutinelli (584767), Miroslav Mojzis (819322), Jitka Frolichova (819326), Ivan Rychlik (126460)   +10 more
core   +1 more source