Diversity of cervical microbiota in asymptomatic chlamydia trachomatis genital infection: a pilot study [PDF]
, 2017 Chlamydia trachomatis genital infection continues to be an important public health problem worldwide due to its increasing incidence. C. trachomatis infection can lead to severe sequelae, such as pelvic inflammatory disease, obstructive infertility, and ...
DI PIETRO, Marisa +6 more
core +3 more sources
Draft genome sequence of Weissella viridescens UCO-SMC3, isolated from the slime of helix aspersa Müller snails [PDF]
, 2019 This report describes the draft genome sequence of Weissella viridescens UCO-SMC3, isolated from Helix aspersa Müller slime. The reads were generated by a whole-genome sequencing (WGS) strategy on an Illumina MiSeq sequencer and were assembled into ...
Albarracín, Leonardo Miguel +10 more
core +1 more source
Plane of nutrition affects the phylogenetic diversity and relative abundance of transcriptionally active methanogens in the bovine rumen [PDF]
, 2017 peer-reviewedMethane generated during enteric fermentation in ruminant livestock species is a major contributor to global anthropogenic greenhouse gas emissions.
Cormican, Paul +7 more
core +4 more sources
Spaced seeds improve k-mer-based metagenomic classification [PDF]
, 2015 Metagenomics is a powerful approach to study genetic content of environmental samples that has been strongly promoted by NGS technologies. To cope with massive data involved in modern metagenomic projects, recent tools [4, 39] rely on the analysis of k ...
Brinda, Karel +2 more
core +2 more sources
Impact of a Glyphosate-Tolerant Soybean Line on the Rhizobacteria, Revealed by Illumina MiSeq
Journal of Microbiology and Biotechnology, 2017 The global commercial cultivation of transgenic crops, including glyphosate-tolerant soybean, has increased widely in recent decades with potential impact on the environment. The bulk of previous studies showed different results on the effects of the release of transgenic plants on the soil microbial community, especially rhizosphere bacteria.
Gui-Hua, Lu +10 more
openaire +2 more sources
Metagenomic data of free cyanide and thiocyanate degrading bacterial communities
Data in Brief, 2017 The data presented in this article contains the bacterial community structure of the free cyanide (CN-) and thiocyanate (SCN-) degrading organisms that were isolated from electroplating wastewater and synthetic SCN- containing wastewater.
Lukhanyo Mekuto +4 more
doaj +1 more source
An optimized methodology for whole genome sequencing of RNA respiratory viruses from nasopharyngeal aspirates [PDF]
, 2018 Over the last decade, the number of viral genome sequences deposited in available databases has grown exponentially. However, sequencing methodology vary widely and many published works have relied on viral enrichment by viral culture or nucleic acid ...
Goya, Stephanie +9 more
core +2 more sources
Complete genome sequences of three African foot-and-mouth disease viruses from clinical samples isolated in 2009 and 2010 [PDF]
, 2016 <p>The complete genome sequences of three foot-and-mouth disease viruses (one virus of each serotype SAT1, SAT2 and O) were directly sequenced from RNA extracted from clinical bovine samples, demonstrating the feasibility of full-genome sequencing ...
De Clercq, Kris +8 more
core +1 more source
Gender dependent gut microbiome in obese Egyptian individuals [PDF]
Records of Pharmaceutical & Biomedical Sciences, 2019 The majority of human microbiota resides in the GIT approximately 3.6 x 1013. Identification of gut microbiota composition in obese individuals and defining bacterial community differences between men and females help in the treatment of certain ...
Mohammed Ali
doaj +1 more source
Evaluating the capacity of human gut microorganisms to colonize the zebrafish larvae (Danio rerio) [PDF]
, 2018 Indexación: Scopus.In this study we evaluated if zebrafish larvae can be colonized by human gut microorganisms. We tested two strategies: (1) through transplantation of a human fecal microbiota and (2) by successively transplanting aerotolerant anaerobic
Angelica Reyes-Jara +14 more
core +2 more sources