Results 161 to 170 of about 133,775 (185)

Assessing the bacterial diversity and functional profiles of the River Yamuna using Illumina MiSeq sequencing

Archives of Microbiology, 2020
A small percentage of the total freshwater on Earth is represented by river water. Microbes have an essential role to play in the biogeochemical cycles, mineralization of organic water, along with xenobiotics degradation. Microbial dynamics are susceptible to environmental stressors which includes pollutants such as antibiotics, metals, and other ...
Kushneet Kaur Sodhi, Mohit Kumar, Dileep Kumar Singh   +2 more
openaire   +2 more sources

Developmental validation of a Nextera XT mitogenome Illumina MiSeq sequencing method for high-quality samples

Forensic Science International: Genetics, 2018
Generating mitochondrial genome (mitogenome) data from reference samples in a rapid and efficient manner is critical to harnessing the greater power of discrimination of the entire mitochondrial DNA (mtDNA) marker. The method of long-range target enrichment, Nextera XT library preparation, and Illumina sequencing on the MiSeq is a well-established ...
Michelle A, Peck, Kimberly, Sturk-Andreaggi, Jacqueline T, Thomas, Robert S, Oliver, Suzanne, Barritt-Ross, Charla, Marshall   +5 more
openaire   +2 more sources

Microbial community analysis of different qualities of pickled radishes by Illumina MiSeq sequencing

Journal of Food Safety, 2018
AbstractPickles are a kind of traditional Chinese fermented vegetable product. To detect microorganism differences, we investigated bacterial and fungal communities in pickled radishes with different qualities and from different regions (Chongqing, Sichuan) using an Illumina MiSeq sequencing method. The results showed that bacterial communities in good‐
Yanyan Tang, Xianrong Zhou, Shenglan Huang, Yuzhu Li, Mou Long, Xin Zhao, Huayi Suo, Zsolt Zalán, Ferenc Hegyi, Muying Du   +9 more
openaire   +1 more source

Improved pipeline for reducing erroneous identification by 16S rRNA sequences using the Illumina MiSeq platform

Journal of Microbiology, 2015
The cost of DNA sequencing has decreased due to advancements in Next Generation Sequencing. The number of sequences obtained from the Illumina platform is large, use of this platform can reduce costs more than the 454 pyrosequencer. However, the Illumina platform has other challenges, including bioinformatics analysis of large numbers of sequences and ...
Yoon-Seong, Jeon, Sang-Cheol, Park, Jeongmin, Lim, Jongsik, Chun, Bong-Soo, Kim   +4 more
openaire   +2 more sources

High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity

Nature Reviews Microbiology, 2012
Nicholas J Loman, Chrystala Constantinidou, Martin J Sergeant   +2 more
exaly  

Clinical and biological insights from viral genome sequencing

Nature Reviews Microbiology, 2017
Charlotte J Houldcroft, Mathew A Beale, Judith Breuer   +2 more
exaly  

Mycobiome diversity: high-throughput sequencing and identification of fungi

Nature Reviews Microbiology, 2018
Henrik R Nilsson, Sten Anslan, Mohammad Bahram   +2 more
exaly  

The design and analysis of transposon insertion sequencing experiments

Nature Reviews Microbiology, 2016
Michael C Chao, Sören Abel, Matthew K Waldor   +2 more
exaly  

Twenty years of bacterial genome sequencing

Nature Reviews Microbiology, 2015
Nicholas J Loman, Mark J Pallen
exaly  

Transposon insertion sequencing: a new tool for systems-level analysis of microorganisms

Nature Reviews Microbiology, 2013
Tim van Opijnen, Andrew Camilli
exaly