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Development of a Lac Operon Concept Inventory (LOCI). [PDF]

open access: yesCBE Life Sci Educ, 2016
Concept inventories (CIs) are valuable tools for educators that assess student achievement and identify misconceptions held by students. Results of student responses can be used to adjust or develop new instructional methods for a given topic. The regulation of gene expression in both prokaryotes and eukaryotes is an important concept in genetics and ...
Stefanski KM   +2 more
europepmc   +4 more sources

Structure of the lac Operon Galactoside Acetyltransferase [PDF]

open access: bronzeStructure, 2002
The galactoside acetyltransferase (thiogalactoside transacetylase) of Escherichia coli (GAT, LacA, EC 2.3.1.18) is a gene product of the classical lac operon. GAT may assist cellular detoxification by acetylating nonmetabolizable pyranosides, thereby preventing their reentry into the cell.
Xingguo Wang   +2 more
openalex   +3 more sources

From Binary to Multivalued to Continuous Models: The lac Operon as a Case Study [PDF]

open access: diamondJournal of Integrative Bioinformatics, 2010
Using the lac operon as a paradigmatic example for a gene regulatory system in prokaryotes, we demonstrate how qualitative knowledge can be initially captured using simple discrete (Boolean) models and then stepwise refined to multivalued logical models ...
Franke Raimo   +2 more
doaj   +3 more sources

Physiological regulation of a decontrolled lac operon [PDF]

open access: bronzeJournal of Bacteriology, 1977
The expression of the lac operon was studied under a variety of growth conditions in induced and in constitutive cells of Escherichia coli that carried different catabolite-insensitive lac promoters. Use of such "decontrolled" lac operons permitted a study of the expression of an operon that was presumably subject only to passive control. Since the use
Barry L. Wanner   +2 more
openalex   +3 more sources

Wrapped-around models for the lac operon complex. [PDF]

open access: yesBiophys J, 2010
The protein-DNA complex, involved in the lac operon of enteric bacteria, is paradigmatic in understanding the extent of DNA bending and plasticity due to interactions with protein assemblies acting as DNA regulators. For the lac operon, two classes of structures have been proposed: 1), with the protein tetramer lying away from the DNA loop (wrapped ...
La Penna G, Perico A.
europepmc   +6 more sources

Deterministic and stochastic population-level simulations of an artificial lac operon genetic network [PDF]

open access: yesBMC Bioinformatics, 2011
Background The lac operon genetic switch is considered as a paradigm of genetic regulation. This system has a positive feedback loop due to the LacY permease boosting its own production by the facilitated transport of inducer into the cell and the ...
Zygourakis Kyriacos, Stamatakis Michail
doaj   +2 more sources

The effect of stochasticity on the lac operon: an evolutionary perspective. [PDF]

open access: yesPLoS Computational Biology, 2007
The role of stochasticity on gene expression is widely discussed. Both potential advantages and disadvantages have been revealed. In some systems, noise in gene expression has been quantified, in among others the lac operon of Escherichia coli.
Milan van Hoek, Paulien Hogeweg
doaj   +2 more sources

Bistable behavior of the lac operon in E. coli when induced with a mixture of lactose and TMG [PDF]

open access: yesFrontiers in Physiology, 2010
In this work we investigate multistability in the lac operon of Escherichia coli when it is induced by a mixture of lactose and the non-metabolizable thiomethyl galactoside (TMG).
Orlando Díaz-Hernández   +3 more
doaj   +2 more sources

Interplay of protein and DNA structure revealed in simulations of the lac operon. [PDF]

open access: yesPLoS ONE, 2013
The E. coli Lac repressor is the classic textbook example of a protein that attaches to widely spaced sites along a genome and forces the intervening DNA into a loop.
Luke Czapla   +3 more
doaj   +2 more sources

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