Results 21 to 30 of about 8,328,477 (294)

Nanopore long-read sequencing of circRNAs [PDF]

open access: yesMethods, 2021
Circular RNA (circRNA) is a group of highly stable RNA molecules with suggested roles in development and disease. They derive from linear pre-mRNAs when a 5'-splice site splices back to an upstream 3'-splice site in a process termed back-splicing. Most circRNAs are multi-exonic and may contain several thousand nucleotides.
Rahimi, Karim   +3 more
openaire   +3 more sources

Identification of Protein Isoforms Using Reference Databases Built from Long and Short Read RNA-Sequencing

open access: yes, 2022
Alternative splicing can lead to distinct protein isoforms. These can have different functions in specific cells and tissues or in different developmental stages.
Aidan P. Tay (1538278)   +4 more
core   +4 more sources

Long-read genome and RNA sequencing resolve a pathogenic intronic germline LINE-1 insertion in APC

open access: yesnpj Genomic Medicine
Familial adenomatous polyposis (FAP) is caused by pathogenic germline variants in the tumor suppressor gene APC. Confirmation of diagnosis was not achieved by cancer gene panel and exome sequencing or custom array-CGH in a family with suspected FAP ...
Alexandra A. Baumann   +17 more
doaj   +2 more sources

Annotation of Full-Length Long Noncoding RNAs with Capture Long-Read Sequencing (CLS). [PDF]

open access: yes, 2021
Metazoan genomes produce thousands of long-noncoding RNAs (lncRNAs), of which just a small fraction have been well characterized. Understanding their biological functions requires accurate annotations, or maps of the precise location and structure of ...
Sílvia Carbonell Sala   +10 more
core   +1 more source

Genome Analysis Methods using Long Read Nanopore Sequencing [PDF]

open access: yes, 2021
Third-generation long-read technologies denote the latest progression in high throughput DNA and RNA sequence analysis. Complementing the widespread second-generation short-read platforms, long-read sequencing adds unique application opportunities by ...
Giesselmann, Pay   +1 more
core   +1 more source

Long-read sequencing in human genetics [PDF]

open access: yesMedizinische Genetik, 2019
Abstract Sanger sequencing revolutionized molecular genetics 40 years ago. However, next-generation sequencing technologies became further game changers and shaped our current view on genome structure and function in health and disease.
Kraft, Florian, Kurth, Ingo
openaire   +2 more sources

Long-read whole genome sequencing of human T cells

open access: yes, 2023
This dataset represent long read sequencing of single human T cells isolated from a human donor. The data set include Illumina whole genome sequencing of 16 single T cells and PacBio HiFi whole genome sequenicng of 5 single T cells   
Joanna Hård (10518953)   +1 more
core   +2 more sources

DNA read count calibration for single-molecule, long-read sequencing

open access: yesScientific Reports, 2022
There are many applications in which quantitative information about DNA mixtures with different molecular lengths is important. Gene therapy vectors are much longer than can be sequenced individually via short-read NGS.
Luis M. M. Soares   +6 more
doaj   +1 more source

Long-read sequencing in fungal identification [PDF]

open access: yesMicrobiology Australia, 2022
Long-read sequencing is currently supported by sequencing platforms from Pacific Biosciences and Oxford Nanopore Technologies, both of which generate ultra-long reads.
Wieland Meyer   +2 more
doaj  

Summary of the long-read sequencing data.

open access: yes, 2023
(A) The sequencing depth (left) and reads N50 (right) of long-read data obtained from 21 pairs of tumor/ normal samples via nanopore sequencer. (B) Cumulative distribution of total bases (Y axis) over read length (X axis) for tumor/ normal samples.
Xiaohuan Lu (5583656)   +9 more
core   +1 more source

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