Results 91 to 100 of about 6,745,034 (280)
Short-reads and long-reads require different annotation strategies.
, 2015 Reads of various length (70–3,000 bp) were simulated with 1% error rate from mock community 160319967-stool1. (A) Predicted open reading frames (ORFs) were derived either via naïve 6-frame translation (6FT) or via the metagenomic gene finder Prodigal ...
Jonathan A. Eisen (93505) +7 more
core +1 more source
Artificial molecular machines and motors—Design and control of nanoscale motion
FEBS Letters, EarlyView.Molecules are constantly moving because of thermal fluctuations, but random motion alone cannot be exploited to perform directional tasks. Artificial molecular machines use chemical, electrical, or light energy to bias this motion. Molecular shuttles, rotary motors, and supramolecular pumps illustrate how nanoscale movement can be controlled and ...
Leonardo Andreoni, Alberto Credi
wiley +1 more source
antimicrobial-peptide-cluster-reads
, 2013 The raw reads that mapped to each sequence cluster given in antimicrobial-peptide-clusters.fasta.
Robert Scott Cornman (419049) +3 more
core +1 more source
FEBS Letters, EarlyView.Transient oligomers formed by intrinsically disordered proteins may be ‘invisible’ to direct detection yet remain accessible to solution NMR through equilibrium‐exchange measurements and pressure‐jump experiments. Complementary methods report on mass, stoichiometry, selected distance distributions, morphology, and internal packing.
Martin D. Gelenter, Ad Bax
wiley +1 more source
Mapping-based genome size estimation
BMC GenomicsWhile the size of chromosomes can be measured under a microscope, obtaining the exact size of a genome remains a challenge. Biochemical methods and k-mer distribution-based approaches allow only estimations. An alternative approach to estimate the genome
Shakunthala Natarajan +2 more
doaj +1 more source
Frontiers in Plant ScienceDiplocarpon coronariae is a fungal pathogen that is prevalent in low-input apple production. Over the past 15 years, it has become increasingly distributed in Europe. However, comprehensive insights into its biology and pathogenicity remain limited.
Sophie Richter +13 more
doaj +1 more source
Transcriptome assembly from long-read RNA-seq alignments with StringTie2
Genome Biology, 2019 RNA sequencing using the latest single-molecule sequencing instruments produces reads that are thousands of nucleotides long. The ability to assemble these long reads can greatly improve the sensitivity of long-read analyses.
Sam Kovaka +5 more
doaj +1 more source
hAssembler: A hybrid de novo genome assembly approach for large genomes
The Indian Journal of Agricultural Sciences, 2020 Genome assembly is a process where large contigs and scaffolds are constructed from raw reads generated by sequencing machines. Based on the size of the generated reads they can be primarily categorized into short reads and long reads.
AMIT KAIRI +2 more
doaj +1 more source
Tumour–host interactions in Drosophila: mechanisms in the tumour micro‐ and macroenvironment
Molecular Oncology, EarlyView.This review examines how tumour–host crosstalk takes place at multiple levels of biological organisation, from local cell competition and immune crosstalk to organism‐wide metabolic and physiological collapse. Here, we integrate findings from Drosophila melanogaster studies that reveal conserved mechanisms through which tumours hijack host systems to ...
José Teles‐Reis, Tor Erik Rusten
wiley +1 more source