Partitions in protein MukB (Escherichia coli K12).
, 2012 Coevolution analysis, realized on a dataset of 200 sequences, detects 11 clusters at dimensions . The dataset is the same as the one used in Fig. 2. A: MukB structure (1qhl:A) with coevolving clusters: in green, the Walker-A motif; in blue, clusters C1 ...
Linda Dib (124223) +1 more
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Synchronized cell analysis of ΔseqA, ΔmukB and parE10 strains.
, 2013 (A) Timing of replication and segregation of the gln locus. Cells were synchronized by baby machine in minimal alanine media at the indicated temperature and assayed for gln copy number (grey triangles) and number of TetR-YFP foci per cell (black circles)
Nicholas Stepankiw (175568) +5 more
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Corrigendum: Dynamic nature of SecA and Its associated proteins in Escherichia coli
Frontiers in Microbiology, 2021 Shun Adachi +2 more
doaj +1 more source
Models for DNA organization by MatP and MukBEF.
, 2019 A. A matS-bridging model for DNA organization in the Ter macrodomain by MatP. MatP recognizes a 13-bp signature DNA sequence called matS that is present exclusively in the Ter macrodomain. There are 23 matS sites separated by one another by an average of
Zhong Qian (8119712) +2 more
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Characterization of a novel human SMC heterodimer homologous to the Schizosaccharomyces pombe Rad18/Spr18 complex [PDF]
, 2001 The structural maintenance of chromosomes (SMC) protein encoded by the fission yeast rad18 gene is involved in several DNA repair processes and has an essential function in DNA replication and mitotic control.
Moghraby, Jeelan S. +5 more
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Mutational Analysis of Bacterial Condensins [PDF]
, 2011 Genetic information is carried on chromosomes in all organisms and chromosome is at the center of all life processes. The chromosome must be properly folded to fit into the cells.
She, Weifeng
core
Mapping enriched dipeptides in the structural model of proteins of ancient and recent origin.
, 2013 A. The N-terminal domain of Escherichia coli MukB chromosome partitioning protein (1QHL), which harbors the most ancient FF structure (c.37.1.12), is compared to the pore-forming domain of colicin A (1COL), which harbors the more recent colicin FF ...
Gustavo Caetano-Anollés (65405) +2 more
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Expression of protein synthesis genes in representative similar conditions.
, 2013 Genes encoding ribosomal proteins are significantly more down-regulated in mukB++ samples than in representative similar conditions, as indicated by their lower log (base 2) expression values.
Valentin V. Rybenkov (501513) +4 more
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Correlation of gene set scores with representative similar conditions.
, 2013 Shown are scatter plot of gene set scores of conditions most similar to MukB induction (5 h time point) based on Rank correlation, which include 75 min recovery from stationary phase in sodium phosphate medium, 1 h after shift from glucose to acetate ...
Valentin V. Rybenkov (501513) +4 more
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Free energy dissipation enhances spatial accuracy and robustness of self-positioned Turing pattern in small biochemical systems. [PDF]
J R Soc Interface, 2023 Zhang D, Zhang C, Ouyang Q, Tu Y.
europepmc +1 more source