Results 91 to 100 of about 41,121 (277)

Procedure for reassembly of PacBio and Illumina data.

open access: yes, 2019
Procedure for reassembly of PacBio and Illumina data.
Masayuki Tanaka (67900)   +5 more
core   +1 more source

Characterization of the dynamic microbiome evolution across thrips species

open access: yesInsect Science, EarlyView.
Comprehensive survey of the microbiome in thrips. The dominant bacterial genera found in thrips include intracellular ones, such as Wolbachia and Spiroplasma, and extracellular ones, including Serratia, Pantoea, and Acinetobacter. We isolated and sequenced high‐quality genomes of two dominant symbionts, Pantoea dispersa and Serratia marcescens.
Xiaodi Hu   +8 more
wiley   +1 more source

ENCODE-like study using PacBio sequencing

open access: yes, 2014
Integrative functional biology of a fungus:  Using PacBio SMRT sequencing to interrogate the genome, epigenome, and transcriptome of Neurospora ...
Elizabeth Tseng (521137)   +6 more
core   +1 more source

A horizontally transferred bacterial gene for pantothenic acid biosynthesis regulates diapause and reproduction in the spider mite Amphitetranychus viennensis

open access: yesInsect Science, EarlyView.
A bacterial‐derived AvPBL gene encoding a pantothenate‐β‐alanine ligase was identified in Amphitetranychus viennensis. RNAi silencing of AvPBL reduced pantothenic acid production, impairing reproduction and diapause induction, while pantothenic acid supplementation rescued these phenotypes.
Meibin Liu   +8 more
wiley   +1 more source

FileS7. Hybrid PacBio-Nanopore assembly

open access: yes, 2019
We assembled nanopore (Solare et al. 2018) and PacBio reads (Kim et al. 2014) into a hybrid assembly using Canu v1.7 with default settings.
Chao-Ting Wu (6697064)   +11 more
core   +1 more source

Refining the Vertebrate Mitochondrial 12S rRNA Secondary Structure by Comparative Analysis

open access: yesIntegrative Zoology, EarlyView.
This flowchart outlines the comprehensive workflow of the study, integrating diverse bioinformatics tools (e.g., NCBI2GO, SSU‐align, bpRNA) and their sequential interactions. Key steps, such as data preprocessing, structural prediction, and evolutionary analysis, are depicted with their respective outputs (e.g., standardized records, consensus ...
Fengxia Li   +6 more
wiley   +1 more source

Substitution error rates measured by PacBio single-molecule sequencing.

open access: yes, 2017
Substitution error rates measured by PacBio single-molecule sequencing.
Jennifer L. Ong (3622634)   +1 more
core   +1 more source

Alignment of the full-length tprK nucleotide sequences obtained by PacBio sequencing.

open access: yes, 2023
Alignment of the full-length tprK nucleotide sequences obtained by PacBio sequencing.
Diane G. Edmondson (9515284)   +4 more
core   +1 more source

Domination Versus Sisterhoods in the Blood Microbiota of Migrating Birds: Patterns of Within‐ and Between‐Individual Blood Parasite Diversity Revealed Through Metabarcoding

open access: yesIntegrative Zoology, EarlyView.
Avian haemosporidian blood parasites are typically identified through Sanger sequencing of a partial cytochrome b fragment, the MalAvi barcoding region. Next‐generation sequencing is seldom used for avian blood parasite identification; this study demonstrates a higher detection rate of co‐infections via metabarcoding and its possible implications ...
Peter Pibaque   +9 more
wiley   +1 more source

P592: HiFi reads provide accurate detection of variants and DNA methylation in challenging regions of the genome

open access: yesGenetics in Medicine Open, 2023
Greg Young   +6 more
doaj   +1 more source

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