Results 101 to 110 of about 41,121 (277)

Complete mitochondrial genome sequence of the freshwater diatom Asterionella formosa

Mitochondrial DNA. Part B. Resources, 2017
We report the complete mitochondrial genome sequence of the freshwater diatom Asterionella formosa. The large 61.9 kb circular sequence encodes 34 proteins and 25 tRNAs that are universally conserved in other sequenced diatoms. We fully resolved a unique
Adrien Villain, Mila Kojadinovic, Carine Puppo, Laura Prioretti, Pierre Hubert, Yizhi Zhang, Gérald Grégori, Alain Roulet, Céline Roques, Jean-Michel Claverie, Brigitte Gontero, Guillaume Blanc   +11 more
doaj   +1 more source

Assembly results with PacBio subreads and Illumina MiSeq reads.

, 2014
Assembly results with PacBio subreads and Illumina MiSeq reads.
Sumitaka Hase (645876), Mayumi Kamada (645875), Atsushi Toyoda (24202), Asao Fujiyama (140709), Yasubumi Sakakibara (241039), Kengo Sato (445249)   +5 more
core   +1 more source

Whole‐Genome Sequencing and Resequencing of Hucho bleekeri Provides Insights into Genetic Mechanisms of Environmental Adaptation

Integrative Zoology, EarlyView.
A high‐quality chromosome‐level reference genome was constructed for Hucho bleekeri. Population structure and environmental adaptation of Hucho species were revealed by whole‐genome resequencing. ABSTRACT Salmonidae represents an important family in the study of genome evolution following genome duplication.
Yeyu Chen, Huanchao Yang, Zhao Liu, Xiaoyun Wu, Qinyao Wei, Yanling Chen, Jue Lin, Yi Yu, Quanyu Tu, Hua Li   +9 more
wiley   +1 more source

P472: Highly scalable pharmacogenomic panel testing with hybrid capture and long-read sequencing*

Genetics in Medicine Open, 2023
Nina Gonzaludo, Sarah Kingan, John Harting, Primo Baybayan, Siyuan Zhang, Tina Han, Leonardo Arbiza, Yao Yang, Nathan Hammond, Stuart Scott   +9 more
doaj   +1 more source

NPBSS: a new PacBio sequencing simulator for generating the continuous long reads with an empirical model

BMC Bioinformatics, 2018
Background PacBio sequencing platform offers longer read lengths than the second-generation sequencing technologies. It has revolutionized de novo genome assembly and enabled the automated reconstruction of reference-quality genomes. Due to its extremely
Ze-Gang Wei, Shao-Wu Zhang
doaj   +1 more source

Chromosome‐Level Genome Assemblies of Two Softshell Turtles with ZZ/ZW Provide Insights into TE‐Driven Recombination Suppression in Sex Chromosomes

Integrative Zoology, EarlyView.
This study presents the first genomic identification and characterization of ZW sex chromosomes in two soft‐shelled turtle species through genome assembly and resequencing. We reveal the structural organization of ZW chromosomes, identifying both pseudoautosomal regions (PARs) and differentiated regions.
Jianjun Liu, Zhiyuan Yang, Min Tang, Tingting Chen, Siqi Liu, Ziyao Meng, Xingjiang Bu, Xingquan Xia, Guang Yang, Liuwang Nie   +9 more
wiley   +1 more source

Snake Gut Microbiota as a Source of Anti‐Inflammatory Probiotics: Isolation and Functional Characterization of Two Novel Strains

Integrative Zoology, EarlyView.
This study assessed the probiotic potential of intestinal microbiomes from five snake species using metagenomics and in vitro isolation, identifying two promising strains (Lactobacillus johnsonii DA0116 and Limosilactobacillus reuteri DA0218) through comprehensive screening.
Xuena Kang, Lan Hu, Jiarong Song, Zhenjie Zhang, Yi Li, Qingqing Zhang, Cuiling Luo, Yu Pang, Peng Guo, Bisong Yue, Ping Li, Zhenxin Fan   +11 more
wiley   +1 more source

Homopolymer count in 38 PacBio sequences (total length: 130117 bp).

, 2015
Homopolymer count in 38 PacBio sequences (total length: 130117 bp).
Katy Latham (745780), Swati Ranade (745772), Patrick Marks (745777), Chen-Shan Chin (30463), Will P. Bultitude (745775), J. Alejandro Madrigal (745779), Neema P. Mayor (745770), Brett Bowman (745776), Kevin Eng (745773), Steven G. E. Marsh (5644), Alasdair J. M. McWhinnie (745771), William Midwinter (745774), James Robinson (5641), Henny Braund (745778)   +13 more
core   +1 more source

Genomic Diversity of the Endangered Guinan Toad‐Headed Lizard and Its Conservation Implications

Integrative Zoology, EarlyView.
We produced HiFi long reads and assembled a high‐quality genome for the Guinan toad‐headed lizard—Phrynocephalus guinanensis—and present a comprehensive conservation genomics assessment. Our findings clearly show population structure, a reduced genetic diversity pattern, and a strong bottleneck in demographic history, reaffirming the endangered status ...
Ying Chen, Song Tan, Yiru Wang, Xia Qiu, Da Kang, Weizhao Yang   +5 more
wiley   +1 more source

PacBio long read sequencing v1

, 2018

openaire   +1 more source