Results 1 to 10 of about 6,979 (164)

New plastome structural rearrangements discovered in core Tillandsioideae (Bromeliaceae) support recently adopted taxonomy

open access: goldFrontiers in Plant Science, 2022
Full plastome sequences for land plants have become readily accessible thanks to the development of Next Generation Sequencing (NGS) techniques and powerful bioinformatic tools. Despite this vast amount of genomic data, some lineages remain understudied.
Sandra I. Vera-Paz   +16 more
doaj   +2 more sources

The complete plastome of the Antarctic moss Andreaea regularis (Andreaeaceae) and its comparative analyses within Bryophyta [PDF]

open access: yesBMC Genomics
Background Andreaeopsida represents a distinct group of nonperistomate mosses, characterized by its phylogenetic position as a sister to peristomate species.
Syahril Sulaiman   +6 more
doaj   +2 more sources

Progress, challenge and prospect of plant plastome annotation

open access: yesFrontiers in Plant Science, 2023
The plastome (plastid genome) represents an indispensable molecular data source for studying phylogeny and evolution in plants. Although the plastome size is much smaller than that of nuclear genome, and multiple plastome annotation tools have been ...
Xiao-Jian Qu   +6 more
doaj   +1 more source

Evolutionary differences in gene loss and pseudogenization among mycoheterotrophic orchids in the tribe Vanilleae (subfamily Vanilloideae)

open access: yesFrontiers in Plant Science, 2023
IntroductionGaleola lindleyana is a mycoheterotrophic orchid belonging to the tribe Vanilleae within the subfamily Vanilloideae.MethodsIn this study, the G.
Lisi Zhou   +4 more
doaj   +1 more source

The first complete plastome sequence from family Flagellariaceae (Flagellaria indica L., Poales)

open access: yesMitochondrial DNA. Part B. Resources, 2021
As a part of phylogenomic study of graminids, we report the complete plastome sequence of Flagellaria indica L. (Flagellariaceae) (NCBI No. MZ504969). This is the first reported complete plastome sequence from the Flagellariaceae.
Sangjin Jo   +3 more
doaj   +1 more source

Complete plastome sequence of Macaranga tanarius (L.) Muell. Arg. (Euphorbiaceae): a fast-growing timber species

open access: yesMitochondrial DNA. Part B. Resources, 2021
Macaranga tanarius (L.) Muell. Arg. is a tree species within Euphorbiaceae, which can be used for building timber and its extract can be used to treat diabetes. In this report, we describe the complete plastome sequence of Macaranga tanarius.
Jiang-Qu Tang   +3 more
doaj   +1 more source

Complete chloroplast genome sequence of an alpine rhubarb Rheum likiangense

open access: yesMitochondrial DNA. Part B. Resources, 2020
Rheum likiangense Samuelsson (Polygonaceae) is an endangered alpine rhubarb in the Qinghai-Tibet Plateau. In this study we report the complete chloroplast genome sequence (plastome) of Rh. likiangense.
Mingyu Liu, Renping Xu
doaj   +1 more source

Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia

open access: yesMitochondrial DNA. Part B. Resources, 2021
Mallotus japonicus is a shrub species in the family of Euphorbiaceae. The study of plastome would be helpful for its phylogenetic study and species identification.
Wan-Ping Wu   +3 more
doaj   +1 more source

Gene loss, genome rearrangement, and accelerated substitution rates in plastid genome of Hypericum ascyron (Hypericaceae)

open access: yesBMC Plant Biology, 2022
Background Comparative genomic analysis exhibits dynamic evolution of plastid genome (plastome) in the clusioid clade of Malpighiales, which comprise five families, including multiple inversions and gene losses.
Sivagami-Jean Claude   +2 more
doaj   +1 more source

Complete plastome sequence of Lonicera gynochlamydea Hemsl. (Caprifoliaceae)

open access: yesMitochondrial DNA. Part B. Resources, 2022
We report and characterize the complete plastome of Lonicera gynochlamydea Hemsl. L. gynochlamydea is a shrub, belonging to the family Caprifoliaceae. Our results show that the length of the complete plastome is 154,643 bp, including 131 genes consisting
Rong-Jia Mo   +5 more
doaj   +1 more source

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