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Progress, challenge and prospect of plant plastome annotation
Frontiers in Plant Science, 2023 The plastome (plastid genome) represents an indispensable molecular data source for studying phylogeny and evolution in plants. Although the plastome size is much smaller than that of nuclear genome, and multiple plastome annotation tools have been ...
Ting-Shuang Yi +2 more
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Frontiers in Plant Science, 2022 Full plastome sequences for land plants have become readily accessible thanks to the development of Next Generation Sequencing (NGS) techniques and powerful bioinformatic tools. Despite this vast amount of genomic data, some lineages remain understudied.
Sandra I Vera-Paz +2 more
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Plant Diversity, 2018 Panax stipuleanatus (Araliaceae) is an endangered and medicinally important plant endemic to China. However, phylogenetic relationships within the genus Panax have remained unclear. In this study, we sequenced the complete plastome of P.
Yunheng Ji, Zhenyan Yang
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Frontiers in Plant Science, 2023 IntroductionGaleola lindleyana is a mycoheterotrophic orchid belonging to the tribe Vanilleae within the subfamily Vanilloideae.MethodsIn this study, the G.
Lisi Zhou +4 more
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The first complete plastome sequence from family Flagellariaceae (Flagellaria indica L., Poales)
Mitochondrial DNA. Part B. Resources, 2021 As a part of phylogenomic study of graminids, we report the complete plastome sequence of Flagellaria indica L. (Flagellariaceae) (NCBI No. MZ504969). This is the first reported complete plastome sequence from the Flagellariaceae.
Sangjin Jo +3 more
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Mitochondrial DNA. Part B. Resources, 2021 Macaranga tanarius (L.) Muell. Arg. is a tree species within Euphorbiaceae, which can be used for building timber and its extract can be used to treat diabetes. In this report, we describe the complete plastome sequence of Macaranga tanarius.
Jiang-Qu Tang +3 more
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Complete chloroplast genome sequence of an alpine rhubarb Rheum likiangense
Mitochondrial DNA. Part B. Resources, 2020 Rheum likiangense Samuelsson (Polygonaceae) is an endangered alpine rhubarb in the Qinghai-Tibet Plateau. In this study we report the complete chloroplast genome sequence (plastome) of Rh. likiangense.
Mingyu Liu, Renping Xu
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Mitochondrial DNA. Part B. Resources, 2021 Mallotus japonicus is a shrub species in the family of Euphorbiaceae. The study of plastome would be helpful for its phylogenetic study and species identification.
Wan-Ping Wu +3 more
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BMC Plant Biology, 2022 Background Comparative genomic analysis exhibits dynamic evolution of plastid genome (plastome) in the clusioid clade of Malpighiales, which comprise five families, including multiple inversions and gene losses.
Sivagami-Jean Claude +2 more
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Mitochondrial DNA. Part B. Resources, 2020 Flueggea virosa is a tropical plant of the Phyllanthaceae family, which has high medicinal value. Here, we report and characterize the complete plastome of F. virosa.
Hong-Tao Wang +3 more
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