Results 21 to 30 of about 12,100 (272)

Characterization and phylogenetic analysis of the complete plastome of Maclura tricuspidata (Moraceae)

open access: yesMitochondrial DNA. Part B. Resources, 2021
The complete chloroplast genome (plastome) of Maclura tricuspidate Carriere, a thorny and deciduous tree, is determined. The plastome is 161,348 bp in length, consisting of a 89,364 bp large single-copy region, a 20,246 bp small single-copy region, and ...
Xin-Xin Zhu, Rong Wang, Xue-Jie Zhang
doaj   +1 more source

Complete plastome sequence of Flueggea virosa (Roxburgh ex Willdenow) Voigt (Phyllanthaceae): a medicinal plant

open access: yesMitochondrial DNA. Part B. Resources, 2020
Flueggea virosa is a tropical plant of the Phyllanthaceae family, which has high medicinal value. Here, we report and characterize the complete plastome of F. virosa.
Hong-Tao Wang   +3 more
doaj   +1 more source

Complete plastome sequence of Xylosma longifolia Clos. (Salicaceae)

open access: yesMitochondrial DNA. Part B. Resources, 2021
Xylosma longifolia is a tree species within Salicaceae and is distributed in Guizhou, Yunnan, Fujian, Guangxi, Guangdong, and Hainan provinces of China as well as in Vietnam, Laos, and India.
Peng Chen   +4 more
doaj   +1 more source

Editorial: Rise to the challenges in plastome phylogenomics

open access: yesFrontiers in Plant Science, 2023
Non peer ...
Wenpan Dong   +6 more
openaire   +4 more sources

The complete plastome sequence of Illigera grandiflora [PDF]

open access: yesMitochondrial DNA Part B, 2021
Illigera grandiflora, a kind of traditional medicinal liana, belongs to the Illigera Blume of the Hernandiaceae. In this study, we reported the characteristics of complete plastome for I. grandiflora. Its total plastome was 156,138 bp in length, comprising a large single-copy region(LSC) of 84,931 bp, a small single-copy region (SSC) of 18,544 bp, and ...
Yu Song   +6 more
openaire   +4 more sources

Complete plastome sequence of Nephelium topengii (Merr.) H. S. Lo (Sapindaceae): an endemic species in Hainan

open access: yesMitochondrial DNA. Part B. Resources, 2020
Nephelium topengii is an evergreen tree of the Sapindaceae family, which can be used as timber. Here, we report and characterize the complete plastome of N. topengii.
Zhi-Xin Zhu   +2 more
doaj   +1 more source

Plastaumatic: Automating plastome assembly and annotation

open access: yesFrontiers in Plant Science, 2022
Plastome sequence data is most often extracted from plant whole genome sequencing data and need to be assembled and annotated separately from the nuclear genome sequence. In projects comprising multiple genomes, it is labour intense to individually process the plastomes as it requires many steps and software.
Wenyi Chen   +2 more
openaire   +3 more sources

Gene loss, genome rearrangement, and accelerated substitution rates in plastid genome of Hypericum ascyron (Hypericaceae)

open access: yesBMC Plant Biology, 2022
Background Comparative genomic analysis exhibits dynamic evolution of plastid genome (plastome) in the clusioid clade of Malpighiales, which comprise five families, including multiple inversions and gene losses.
Sivagami-Jean Claude   +2 more
doaj   +1 more source

Evolutionary relationships in Panicoid grasses based on plastome phylogenomics (Panicoideae; Poaceae) [PDF]

open access: yes, 2016
Background: Panicoideae are the second largest subfamily in Poaceae (grass family), with 212 genera and approximately 3316 species. Previous studies have begun to reveal relationships within the subfamily, but largely lack resolution and/or robust ...
Burke, Sean V.   +9 more
core   +2 more sources

Plastome characteristics of Cannabaceae

open access: yesPlant Diversity, 2018
Cannabaceae is an economically important family that includes ten genera and ca. 117 accepted species. To explore the structure and size variation of their plastomes, we sequenced ten plastomes representing all ten genera of Cannabaceae. Each plastome possessed the typical angiosperm quadripartite structure and contained a total of 128 genes.
Huanlei Zhang   +4 more
openaire   +4 more sources

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