Results 11 to 20 of about 8,260,919 (293)

Comparison of human protein-protein interaction maps [PDF]

open access: yesBioinformatics, 2007
: Large-scale mappings of protein-protein interactions have started to give us new views of the complex molecular mechanisms inside a cell. After initial projects to systematically map protein interactions in model organisms such as yeast, worm and fly ...
Erich Wanker   +3 more
core   +4 more sources

Improving the resolution of interaction maps: A middleground between high-resolution complexes and genome-wide interactomes [PDF]

open access: yes, 2013
Protein-protein interactions are ubiquitous in Biology and therefore central to understand living organisms. In recent years, large-scale studies have been undertaken to describe, at least partially, protein-protein interaction maps or interactomes for a
Mora, Joan Segura
core   +5 more sources

Network-based protein-protein interaction prediction method maps perturbations of cancer interactome.

open access: yesPLoS Genetics, 2021
The perturbations of protein-protein interactions (PPIs) were found to be the main cause of cancer. Previous PPI prediction methods which were trained with non-disease general PPI data were not compatible to map the PPI network in cancer.
Jiajun Qiu   +4 more
doaj   +1 more source

Identifying Potential Biomarkers in Colorectal Cancer and Developing Non-invasive Diagnostic Models Using Bioinformatics Approaches [PDF]

open access: yesAvicenna Journal of Medical Biochemistry, 2020
Background: Colorectal cancer (CRC) is one of the most frequent causes of gastrointestinal tumors. Due to the invasiveness of the current diagnostic methods, there is an urgent need to develop non-invasive diagnostic approaches for CRC.
Massoud Saidijam   +2 more
doaj   +1 more source

Imputation of quantitative genetic interactions in epistatic MAPs by interaction propagation matrix completion [PDF]

open access: yes, 2014
A popular large-scale gene interaction discovery platform is the Epistatic Miniarray Profile (E-MAP). E-MAPs benefit from quantitative output, which makes it possible to detect subtle interactions.
Zupan, Blaz, Zitnik, Marinka
core   +2 more sources

A Protein Interaction Map of the Mitotic Spindle [PDF]

open access: yesMolecular Biology of the Cell, 2007
The mitotic spindle consists of a complex network of proteins that segregates chromosomes in eukaryotes. To strengthen our understanding of the molecular composition, organization, and regulation of the mitotic spindle, we performed a system-wide two-hybrid screen on 94 proteins implicated in spindle function in Saccharomyces cerevisiae. We report 604
Wong, Jonathan   +11 more
openaire   +3 more sources

Cost-Effective Mapping of Genetic Interactions in Mammalian Cells

open access: yesFrontiers in Genetics, 2021
Comprehensive maps of genetic interactions in mammalian cells are daunting to construct because of the large number of potential interactions, ~ 2 × 108 for protein coding genes. We previously used co-inheritance of distant genes from published radiation
Arshad H. Khan, Desmond J. Smith
doaj   +1 more source

Mapping protein–DNA interactions with DiMeLo-seq [PDF]

open access: yesNature Protocols, 2022
Abstract We recently developed Di rected Me thylation with Lo ng-read seq uencing (DiMeLo-seq) to map protein-DNA interactions genome wide.
Annie Maslan   +8 more
openaire   +3 more sources

Identification of Pathways and Key Genes in Venous Remodeling After Arteriovenous Fistula by Bioinformatics Analysis

open access: yesFrontiers in Physiology, 2020
The arteriovenous fistula (AVF) is the first choice for vascular access for hemodialysis of renal failure patients. Venous remodeling after exposure to high fistula flow is important for AVF to mature but the mechanism underlying remodeling is still ...
Kong Jie   +13 more
doaj   +1 more source

Identification of significant genes and pathways associated with tenascin-C in cancer progression by bioinformatics analysis

open access: yesAdvanced Biomedical Research, 2022
Background: Tenascin-C (TNC) is a large glycoprotein of the extracellular matrix which associated with poor clinical outcomes in several malignancies. TNC over-expression is repeatedly observed in several cancer tissues and promotes several processes in ...
Ilnaz Rahimmanesh   +2 more
doaj   +1 more source

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