deltaTE: Detection of Translationally Regulated Genes by Integrative Analysis of Ribo-seq and RNA-seq Data. [PDF]
Curr Protoc Mol Biol, 2019 Chothani S +7 more
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Implementing recombineering, Ribo-seq and DYI imaging to study plant hormones.
, 2019 Every aspect of a plant life cycle, from germination to senescence, is coordinated by a small group of plant hormones. These small molecules do not work in isolation but through a complex network of interactions. In order to uncover the intricate interactions between different plant hormones, we have implemented a variety of technological tools, among ...
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Detecting and quantifying the translated transcriptome with Ribo-seq data
, 2017 Calviello, Lorenzo
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<i>Mettl5</i> coordinates protein production and degradation of PERIOD to regulate sleep in <i>Drosophila</i>. [PDF]
ElifeWu X, Yang X, Fu T, Rong Y, Du J.
europepmc +1 more source
A Proteogenomic Approach to Discover Novel lncRNA-Derived Microproteins and Their Potential Clinical Utility in Hepatocellular Carcinoma. [PDF]
Mol Cell ProteomicsLi B, Joshi K, Wang DO.
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Predicted bacterial uRBSs reveal translational coupling and ribosome-mediated RBS occlusion as gene-controlling mechanisms. [PDF]
MicrolifeDietz T +8 more
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Bridging single-molecule and genome-wide studies of cellular mRNA translation. [PDF]
RNAKoch A +5 more
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Harnessing toxin-mediated ribosome stalling as a complementary tool to annotate bacterial ORFs. [PDF]
Nucleic Acids ResTroian EA +7 more
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