Results 51 to 60 of about 185,351 (165)
RiboNT: A Noise-Tolerant Predictor of Open Reading Frames from Ribosome-Protected Footprints
Life, 2021 Ribo-seq, also known as ribosome profiling, refers to the sequencing of ribosome-protected mRNA fragments (RPFs). This technique has greatly advanced our understanding of translation and facilitated the identification of novel open reading frames (ORFs ...
Bo Song, Mengyun Jiang, Lei Gao
doaj +1 more source
Compatible levels of editing between Ribo-seq and RNA-seq data.
, 2023 Levels of A-to-I editing in left ventricle DCM patients from RNA-seq (n = 37) and Ribo-seq (n = 30) datasets. Cutoff of ≥ 10 reads for each site. (JPG)
Tomer D. Mann (15203465) +3 more
core +1 more source
Fig2A-B AspRS and GlnRS ribo-seq reads in WT and dfrq.csv
, 2022 Fig2A-B AspRS and GlnRS ribo-seq reads in WT and ...
Kathrina Castillo (13712005)
core +1 more source
Fig2C-D AspRS and GlnRS ribo-seq reads in WT and dfrq.csv
, 2022 Fig2C-D AspRS and GlnRS ribo-seq reads in WT and ...
Kathrina Castillo (13712005)
core +1 more source
Phase sorted aaRS ribo-seq read values in WT and dfrq.csv
, 2022 Phase sorted aaRS ribo-seq read values in WT and ...
Kathrina Castillo (13712005)
core +1 more source
What can Ribo-seq and proteomics tell us about the non-canonical proteome?
, 2023 Ribosome profiling (Ribo-seq) has proven transformative for our understanding of the human genome and proteome by illuminating thousands of non-canonical sites of ribosome translation outside of the currently annotated coding sequences (CDSs).
Prensner JR +8 more
europepmc +2 more sources
PLoS Computational Biology, 2023 Gene expression is the synthesis of proteins from the information encoded on DNA. One of the two main steps of gene expression is the translation of messenger RNA (mRNA) into polypeptide sequences of amino acids.
Carole Chevalier +11 more
doaj +1 more source
Discovering microproteins: making the most of ribosome profiling data
RNA Biology, 2023 Building a reference set of protein-coding open reading frames (ORFs) has revolutionized biological process discovery and understanding. Traditionally, gene models have been confirmed using cDNA sequencing and encoded translated regions inferred using ...
Sonia Chothani +3 more
doaj +1 more source
, 2021 Ribosome profiling (Ribo-seq) has catalyzed a paradigm shift in our understanding of the translational ‘vocabulary’ of the human genome, discovering thousands of translated open reading frames (ORFs) within long non-coding RNAs and presumed untranslated ...
Schulz, Jana Felicitas +55 more
core +1 more source
Summary of the mRNA-Seq and Ribo-Seq results.
, 2018 Summary of the mRNA-Seq and Ribo-Seq results.
Liping Wei (10166) +5 more
core +1 more source