Results 11 to 20 of about 161,339 (227)

Multiplex-Ready PCR: A new method for multiplexed SSR and SNP genotyping [PDF]

BMC Genomics, 2008
Background Microsatellite (SSR) and single nucleotide polymorphism (SNP) markers are widely used in plant breeding and genomic research. Thus, methods to improve the speed and efficiency of SSR and SNP genotyping are highly desirable.
Nguyen Thao M, Hayden Matthew J, Waterman Amanda, Chalmers Kenneth J   +3 more
doaj   +6 more sources

Advancing Grapevine Breeding with Reliable SSR Genotyping: The Qsep100 Approach

Horticulturae
Background: Grapevine breeding increasingly relies on molecular tools to introduce durable resistance to downy and powdery mildew. However, the reproducibility of simple sequence repeat (SSR) markers across platforms remains a challenge for marker ...
Ivana Tomaz, Nina Buljević, Iva Šikuten, Darko Preiner   +3 more
doaj   +3 more sources

SSR Genotyping

, 2014
SSR genotyping involves the use of simple sequence repeats (SSRs) as DNA markers. SSRs, also called microsatellites, are a type of repetitive DNA sequence ubiquitous in most plant genomes. SSRs contain repeats of a motif sequence 1-6 bp in length.
Mason, Annaliese S., Annaliese S. Mason
openaire   +6 more sources

Genotyping of Croatian Olive Germplasm with Consensus SSR Markers

Horticulturae
Leaf samples of 226 cultivated olive trees were collected from traditionally managed olive orchards and genotyped with eleven consensual SSR markers.
Snježana Bolarić, Aleš Vokurka, Kristina Batelja Lodeta, Đani Benčić   +3 more
doaj   +2 more sources

DNA Fingerprinting and Genotyping of Cotton Varieties Using SSR Markers

Notulae Botanicae Horti Agrobotanici Cluj-Napoca, 2012
DNA fingerprinting and genetic diversity analysis helps direct selective breeding and conservation of plant species. Since simple sequence repeats (SSR) markers are co-dominant, they can predict level of genetic diversity and thereby protect plant ...
Mohammad Nazrul ISLAM, Md. Rezwan MOLLA, Md. Motiar ROHMAN, Mirza HASANUZZAMAN, Shah Mohammad Naimul ISLAM, Lutfur RAHMAN   +5 more
doaj   +3 more sources

Genotyping of rice accessions using SSR markers [PDF]

International Journal of Chemical Studies, 2020
Molecular characterization of germplasm accessions of rice revealed genetic polymorphism and ensured unambiguous identification. A total of 24 SSR markers were used covering all the chromosomes of rice for their molecular characterization and discrimination.
Sahu Shail, NK Rastogi, PK Chandrakar, Ritu R Saxena   +3 more
openaire   +1 more source

Characterization of Annona Genotypes by ISSR and SSR Markers

Bhartiya Krishi Anusandhan Patrika, 2022
Background: Annona spp. are one of the underutilized fruit crop having great commercial and medicinal value and large diversity present in Maharashtra which is untapped. The present study conducted to characterize the Annona genotypes by ISSR and SSR markers for future germplasm conservation and crop improvement programme.
Y.S. Saitwal, A.M. Musmade, A.A. Kale, V.S. Supe, V.R. Joshi, S.A. Ranpise, S.S. Mehetre   +6 more
openaire   +1 more source

Characterization of hawthorn (Crataegus spp.) genotypes by SSR markers [PDF]

Physiology and Molecular Biology of Plants, 2018
Hawthorn (Crataegus spp.) is an edible wild fruit that is used in traditional medicine, landscape studies, and food and beverage industries in many countries. It is an important wild plant species in Turkey and is numerous in the Yozgat Province. Genetic and breeding studies on hawthorn are very limited.
ERCİŞLİ, Sezai, KELES, Hakan, ARAS, Servet, KAFKAS, SALİH, GUNEY, Murat   +4 more
openaire   +4 more sources

Construction of a SNP and SSR linkage map in autotetraploid blueberry using genotyping by sequencing [PDF]

The construction of the first genetic map in autotetraploid blueberry has been made possible by the development of new SNP markers developed using genotyping by sequencing in a mapping population created from a cross between two key highbush blueberry ...
Jorgensen, Linzi, Brown, Allan, Vining, Kelly, Olmstead, James W., Wheeler, Edmund J., McCallum, Susan, Hackett, Christine A., Rowland, Lisa J., Poland, Jesse A., Bassil, Nahla V., Hancock, James F., Buck, Emily, Jackson, Eric, Wiedow, Claudia, Graham, Julie   +14 more
core   +6 more sources

Typing of Mycobacterium avium subspecies paratuberculosis isolates from Newfoundland using fragment analysis. [PDF]

PLoS ONE, 2015
Short Sequence Repeat (SSR) typing of Mycobacterium avium subspecies paratuberculosis (Map) isolates is one of the most commonly used method for genotyping this pathogen.
Milka P Podder, Susan E Banfield, Greg P Keefe, Hugh G Whitney, Kapil Tahlan   +4 more
doaj   +1 more source