Results 21 to 30 of about 161,339 (227)

Phenotypic and Genotypic Diversity of Roots Response to Salt in Durum Wheat Seedlings

Plants, 2023
Soil salinity is a serious threat to food production now and in the near future. In this study, the root system of six durum wheat genotypes, including one highly salt-tolerant (J.
Ieva Urbanavičiūtė, Luca Bonfiglioli, Mario A. Pagnotta   +2 more
doaj   +1 more source

Novel SSR markers from BAC-end sequences, DArT arrays and a comprehensive genetic map with 1,291 marker loci for chickpea (Cicer arietinum L.) [PDF]

, 2011
Chickpea (Cicer arietinum L.) is the third most important cool season food legume, cultivated in arid and semi-arid regions of the world. The goal of this study was to develop novel molecular markers such as microsatellite or simple sequence repeat (SSR)
Varghese, Nicy, Nayak Spurthi N., Polavarapu B Kavikishor, Upadhyaya, Hari D., Town, C D, Gudipati, Srivani, Bohra, Abhishek, Thirunavukkarasu, Nepolean, Nayak, S N, Kulwal, P L, Winter, P, Nayak, Spurthi N., Peter Winter, Varghese, N., Pawan L. Kulwal, Pooran M. Gaur, Upadhyaya Hari D., Penmetsa, R.V., Kilian, Andrzej, Kavikishor, P.B., Gudipati Srivani, Thudi, M, Thudi, M., Rajeev K Varshney, Bohra Abhishek, Varshney Rajeev K., Nicy Varghese, Varshney, R.K., R Varma Penmetsa, Shah, Trushar M., Bohra, A., Kahl Günter, KaviKishor Polavarapu B., Mahendar Thudi, Kilian Andrzej, Gaur, P M, Gaur, P., Abhishek Bohra, Nayak, S.N., Kilian, A, Cook, D.R., Trushar M Shah, Shah, T.M., Cook, D., Nepolean Thirunavukkarasu, Christopher D Town, Kahl, Günter, Hari D. Upadhyaya, Shah, T M, Cook, D R, Upadhyaya, H D, Hansson, Bengt, Town, Christopher D., Spurthi N. Nayak, Kulwal, P.L., Winter, P., Hansson, B., Günter Kahl, Polavarapu B. KaviKishor, Town Christopher D., Srivani Gudipati, Kahl, G., Spurthi N Nayak, Winter, Peter, Gaur, P.M., Cook, Douglas R., Cook Douglas R., Christopher D. Town, Pawan L Kulwal, Gaur, Pooran M., Trushar M. Shah, Thudi Mahendar, Varghese, N, Andrzej Kilian, Thudi, Mahendar, Varshney, Rajeev K., Winter Peter, Gaur Pooran M., Varshney, R K, Kilian, A., Upadhyaya, H.D., Thirunavukkarasu, N., Rajeev K. Varshney, KaviKishor, Polavarapu B., Kulwal, Pawan L., Varghese Nicy, Pooran M Gaur, Thirunavukkarasu Nepolean, Town, C.D., Bohra, A, R. Varma Penmetsa, Douglas R Cook, Penmetsa, R. Varma, Kulwal Pawan L., Penmetsa, R V, Penmetsa R. Varma, Douglas R. Cook, Kavi Kishor, P B, Gudipati, S, Thirunavukkarasu, N, Hari D Upadhyaya, Gudipati, S., Shah, T., Shah Trushar M., Kahl, G   +104 more
core   +2 more sources

Development of genome-wide informative simple sequence repeat markers for molecular diversity analysis in chickpea and development of web resource

Frontiers in Plant Science, 2015
Development of informative polymorphic simple sequence repeat (SSR) markers at a genome-wide scale is essential for efficient large-scale genotyping applications.
SWARUP KUMAR PARIDA, Mohit eVerma, Santosh eYadav, Supriya eAmbawat, Shouvik eDas, Rohini eGarg, Mukesh eJain   +6 more
doaj   +1 more source

Development and test of 21 multiplex PCRs composed of SSRs spanning most of the apple genome [PDF]

, 2009
A series of 21 multiplex (MP) polymerase chain reactions containing simple sequence repeat (SSR) markers spanning most of the apple genome has been developed. Eighty-eight SSR markers, well distributed over all 17 linkage groups (LGs), have been selected.
Rikkerink, E., Weg, W.E., van de, Komjanc, Matteo, Komjanc, M, L. Kodde, V. Cova, Barbaro, E, Gobbin, Davide, Boudichevskaia, A., E. Barbaro, Dunemann, F, Fernandez-Fernandez, F, Kodde, L.P., Mott, D, Cova, Valentina, Stankiewicz-Kosyl, M., Stankiewicz Kosyl, M., Durel, C. E., Gessler, C., C. E. Durel, Cova, V, Gessler,C., Toller, C., Dunemann, F., A. Boudichevskaia, Dunemann, Frank, Mott, Daniela, Fernandez Fernandez, F., W. E. van de Weg, Weg, W.E. van de, Van De Weg, W. E., K. Evans, Patocchi, Andrea, Rezzonico, F, E. Rikkerink, Gianfranceschi, Luca, Rezzonico, Fabio, Fernandez-Fernandez, F., Mathis-Jeanneteau, F., Boudichevskaja, A., Barbaro, Enrico, D. Mott, Gobbin, D, Toller, Chiara, F. Fernandez Fernandez, F. Rezzonico, Evans, K., Komjanc, M., F. Dunemann, Patocchi, A., Rikkerink, E.H.A., D. Gobbin, Barbaro, E., Toller, C, Costa, Fabrizio, Rikkerink, E, A. Patocchi, Cova, V., M. Stankiewicz Kosyl, Mathis Jeanneteau, F., C. Gessler, L. Gianfranceschi, Kodde, L., Gianfranceschi, L., Mott, D., Evans, K, Boudichevskaia, A, M. Komjanc, Gobbin, D., Costa, F., Gianfranceschi, L, Durel, C.E., F. Mathis Jeanneteau, Stankiewicz-Kosyl, M, F. Costa, C. Toller, Van de Weg, W.E, Gessler, Cesare, Kodde, L, Rezzonico, F., Durel, Charles Eric, Mathis, Fabienne, Van de Weg, W.E.   +82 more
core   +1 more source

A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits [PDF]

, 2006
Background: Molecular marker technologies are undergoing a transition from largely serial assays measuring DNA fragment sizes to hybridization-based technologies with high multiplexing levels.
Wenzl Peter, Haobing Li, Harsh Raman, Andris Kleinhofs, Huttner, E., Xia Ling, Zhou, M., Wang, J., Hearnden, P., Zhou Meixue, Meixue Zhou, Chalmers, K.J., Paul, E., Ovesná, J., Smith, K., Li Haobing, Muehlbauer Gary J, Caig, V., Huttner Eric, Hearnden Phillippa, Chalmers Ken J, Kleinhofs Andris, Smith Kevin P, Jaroslava Ovesná, Kevin P Smith, Andrzej Kilian, Muehlbauer, G., Rosy Raman, et al., Chalmers, K., Gary J Muehlbauer, Kilian, A., Carling, J., Ken J Chalmers, Paul Edie, David Poulsen, Kilian Andrzej, Raman, R., Junping Wang, Poulsen David, Edie Paul, Phillippa Hearnden, Carling Jason, Peter Wenzl, Ling Xia, Ovesná Jaroslava, Eric Huttner, Wang Junping, Maier Christina, Kleinhofs, A., Mehmet Cakir, Raman, H., Cakir Mehmet, Maier, C., Raman Harsh, Smith, K.P., Muehlbauer, G.J., Caig Vanessa, Jason Carling, Christina Maier, Cakir, M., Raman Rosy, Xia, L., Poulsen, D., Li, H., Vanessa Caig, Wenzl, P., Plant Science   +67 more
core   +2 more sources

Special features of RAD Sequencing data:implications for genotyping [PDF]

, 2012
Restriction site-associated DNA Sequencing (RAD-Seq) is an economical and efficient method for SNP discovery and genotyping. As with other sequencing-by-synthesis methods, RAD-Seq produces stochastic count data and requires sensitive analysis to develop ...
Fuentes-Utrilla, Pablo, Blaxter, Mark L, Pablo Fuentes-utrilla, Karim Gharbi, Davey, John W, Cezard, Timothée, John W. Davey, Gharbi, Karim, Pablo Fuentes‐Utrilla, Cathlene Eland, Timothée Cezard, Mark L. Blaxter, Eland, Cathlene   +12 more
core   +1 more source

BatchPrimer3: A high throughput web application for PCR and sequencing primer design

BMC Bioinformatics, 2008
Background Microsatellite (simple sequence repeat – SSR) and single nucleotide polymorphism (SNP) markers are two types of important genetic markers useful in genetic mapping and genotyping.
Ma Yaqin, Luo Ming-cheng, Gu Yong, Huo Naxin, You Frank M, Hane Dave, Lazo Gerard R, Dvorak Jan, Anderson Olin D   +8 more
doaj   +1 more source

Fingerprinting of Plum (Prunus domestica) Genotypes in Lithuania Using SSR Markers

Plants, 2023
This study’s aim was to evaluate the genetic diversity of European plum (Prunus domestica) cultivars and hybrids in Lithuania using SSR markers. In total, 107 plum genotypes (including 68 European plum cultivars and 39 hybrids) from the genetic resources collection of the Institute of Horticulture of the Lithuanian Research Centre for Agriculture and ...
Raminta Antanynienė, Jūratė Bronė Šikšnianienė, Vidmantas Stanys, Birutė Frercks   +3 more
openaire   +3 more sources

EST and EST-SSR marker resources for Iris

BMC Plant Biology, 2009
Background Limited DNA sequence and DNA marker resources have been developed for Iris (Iridaceae), a monocot genus of 200–300 species in the Asparagales, several of which are horticulturally important. We mined an I. brevicaulis-I. fulva EST database for
Taylor Christopher A, Ed Johnson Virgil, Pratt Lee H, Cordonnier-Pratt Marie-Michele, Okashah Rebecca A, Tang Shunxue, Arnold Michael L, Knapp Steven J   +7 more
doaj   +1 more source

Relationship between Phenolic Compounds and Antioxidant Activity in Berries and Leaves of Raspberry Genotypes and Their Genotyping by SSR Markers

Antioxidants, 2022
The red raspberry is one of the world’s most popular berries. The main direction of its breeding has switched to nutritional quality, and the evaluation of raspberry germplasm for antioxidant content and activity is very important. As berries, raspberry leaves contain valuable bioactive compounds, but the optimal time for their collection is unknown ...
Vadim G. Lebedev, Tatyana N. Lebedeva, Elena O. Vidyagina, Vladimir N. Sorokopudov, Anna A. Popova, Konstantin A. Shestibratov   +5 more
openaire   +3 more sources