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Challenges in Third-Generation DNA Sequencing [PDF]

open access: yesJournal of Nanomedicine & Nanotechnology, 2012
DNA sequencing is one of the leading precursors of the personalized medicine, i.e. for reading hereditary traits for predisposition to diseases which are coded in DNA, and thus to prevent, diagnose, and treat diseases. After the success of the Human Genome Project in 2003, which achieved reading a human genome for $3B spent over thirteen years, the ...
openaire   +1 more source

Myostatin Gene Analysis in the First Generation of the Belgian Blue Cattle in Indonesia [PDF]

open access: yes, 2016
A study was conducted to identify the variations of the myostatin and also to evaluate the existence of genetic marker for “double muscling” (11-bp deletion in the third exon of the myostatin gene) in the first generation of Belgian Blue cattle in ...
Agung, P. P. (P)   +2 more
core   +2 more sources

Highly Contiguous Genome Assemblies of 15 Drosophila Species Generated Using Nanopore Sequencing

open access: yesG3: Genes, Genomes, Genetics, 2018
The Drosophila genus is a unique group containing a wide range of species that occupy diverse ecosystems. In addition to the most widely studied species, Drosophila melanogaster, many other members in this genus also possess a well-developed set of ...
Danny E. Miller   +3 more
doaj   +1 more source

Pyogenic liver abscess caused by extended-spectrum β-lactamase-producing hypervirulent Klebsiella pneumoniae diagnosed by third-generation sequencing: a case report and literature review

open access: yesJournal of International Medical Research, 2023
We report a case of a woman with diabetes mellitus and choledocholithiasis who had a low fever with chills and severe weakness for 7 days. The patient’s abdominal tenderness was positive.
Ting Zhang   +4 more
semanticscholar   +1 more source

DiBELLA: Distributed long read to long read alignment [PDF]

open access: yes, 2019
We present a parallel algorithm and scalable implementation for genome analysis, specifically the problem of finding overlaps and alignments for data from "third generation" long read sequencers [29]. While long sequences of DNA offer enormous advantages
Buluç, A   +4 more
core   +2 more sources

A new targeted CFTR mutation panel based on next-generation sequencing technology [PDF]

open access: yes, 2017
Searching for mutations in the cystic fibrosis transmembrane conductance regulator gene (CFTR) is a key step in the diagnosis of and neonatal and carrier screening for cystic fibrosis (CF), and it has implications for prognosis and personalized therapy ...
Alberti, Luisella   +10 more
core   +2 more sources

A pilot study for channel catfish whole genome sequencing and de novo assembly [PDF]

open access: yes, 2011
Background Recent advances in next-generation sequencing technologies have drastically increased throughput and significantly reduced sequencing costs.
Yanliang Jiang   +7 more
core   +2 more sources

An Overview of the Second and Third-Generation of DNA Sequencing Technologies [PDF]

open access: yesJournal of Advanced Biomedical Sciences, 2017
DNA sequence determination is a tremendous human achievement. DNA sequencing includes several methods and technologies in use for determining the order of the nucleotide bases in a molecule of nucleic acid.
Fatemeh Ghorbani Parsa   +1 more
doaj  

Rapid diagnosis of Mycobacterium marinum infection using targeted nanopore sequencing: a case report

open access: yesFrontiers in Cellular and Infection Microbiology, 2023
Mycobacterium marinum (M. marinum) is a non-tuberculous mycobacterium (NTM) that can cause infectious diseases in aquatic animals and humans. Culture-based pathogen detection is the gold standard for diagnosing NTM infection. However, this method is time-
Yan-Ying Huang   +4 more
doaj   +1 more source

Targeting RNA with Next‐ and Third‐Generation Sequencing Improves Pathogen Identification in Clinical Samples

open access: yesAdvancement of science, 2021
Fast and accurate identification of microbial pathogens is critical for the proper treatment of infections. Traditional culture‐based diagnosis in clinics is increasingly supplemented by metagenomic next‐generation‐sequencing (mNGS).
Na Zhao   +18 more
semanticscholar   +1 more source

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