Results 21 to 30 of about 320,395 (368)

HTLV-1 persistence and leukemogenesis: A game of hide-and-seek with the host immune system

open access: yesFrontiers in Immunology, 2022
Human T-cell leukemia virus type 1 (HTLV-1), a retrovirus which mainly infects CD4+ T cells and causes adult T-cell leukemia/lymphoma (ATL), is primarily transmitted via direct cell-to-cell transmission.
Benjy J. Y. Tan   +3 more
doaj   +1 more source

Pathovar Transcriptomes [PDF]

open access: yesmSystems, 2017
Archetypal pathogenic bacterial strains are often used to elucidate regulatory networks of an entire pathovar, which encompasses multiple lineages and phylogroups. With enteropathogenic Escherichia coli (EPEC) as a model system, Hazen and colleagues (mSystems 6:e00024-17, 2017, https://doi.org/10.1128 ...
Amy Platenkamp, Jay L. Mellies
openaire   +3 more sources

Identification and characterization of a novel enhancer in the HTLV-1 proviral genome

open access: yesNature Communications, 2022
Human T-cell leukemia virus type 1 (HTLV-1) is an oncogenic virus with constantly active antisense transcription from the proviral genome. Here, Matsuo et al.
Misaki Matsuo   +16 more
doaj   +1 more source

A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics

open access: yesNature Communications, 2023
Spatial transcriptomics technologies are used to profile transcriptomes while preserving spatial information, which enables high-resolution characterization of transcriptional patterns and reconstruction of tissue architecture.
Haoyang Li   +9 more
semanticscholar   +1 more source

High-depth spatial transcriptome analysis by photo-isolation chemistry

open access: yesNature Communications, 2021
Spatial analysis of RNAseq data is important. Here the authors report a method for transcriptome profiling combined with photo-isolation chemistry to allow determination of expression profiles specifically from photo-irradiated regions of interest which ...
Mizuki Honda   +7 more
doaj   +1 more source

Single-cell and spatial transcriptomics: deciphering brain complexity in health and disease

open access: yesNature Reviews Neurology, 2023
High-throughput single-cell technologies enable multiple layers of molecular biology to be probed at the single-cell level. Single-cell transcriptomic atlases spanning multiple developmental stages have been generated with the aim of dissecting the ...
Monika Piwecka   +2 more
semanticscholar   +1 more source

An introduction to spatial transcriptomics for biomedical research

open access: yesGenome Medicine, 2022
Single-cell transcriptomics (scRNA-seq) has become essential for biomedical research over the past decade, particularly in developmental biology, cancer, immunology, and neuroscience.
Cameron G. Williams   +4 more
semanticscholar   +1 more source

Probabilistic embedding, clustering, and alignment for integrating spatial transcriptomics data with PRECAST

open access: yesbioRxiv, 2023
Spatially resolved transcriptomics involves a set of emerging technologies that enable the transcriptomic profiling of tissues with the physical location of expressions. Although a variety of methods have been developed for data integration, most of them
Wei Liu   +10 more
semanticscholar   +1 more source

Single-Cell Molecular Characterization to Partition the Human Glioblastoma Tumor Microenvironment Genetic Background

open access: yesCells, 2022
Background: Glioblastoma (GB) is a devastating primary brain malignancy. The recurrence of GB is inevitable despite the standard treatment of surgery, chemotherapy, and radiation, and the median survival is limited to around 15 months.
Francesca Lessi   +10 more
doaj   +1 more source

Spatial transcriptomics of dorsal root ganglia identifies molecular signatures of human nociceptors

open access: yesScience Translational Medicine, 2022
Nociceptors are specialized sensory neurons that detect damaging or potentially damaging stimuli and are found in the dorsal root ganglia (DRG) and trigeminal ganglia.
Diana Tavares-Ferreira   +14 more
semanticscholar   +1 more source

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