Results 81 to 90 of about 57,794 (383)

Light-responsive expression atlas reveals the effects of light quality and intensity in Kalanchoë fedtschenkoi, a plant with crassulacean acid metabolism. [PDF]

, 2020
BackgroundCrassulacean acid metabolism (CAM), a specialized mode of photosynthesis, enables plant adaptation to water-limited environments and improves photosynthetic efficiency via an inorganic carbon-concentrating mechanism.
Borland, Anne M, Chen, Jin-Gui, Cushman, John C, Garcia, Travis M, Hu, Rongbin, Lipzen, Anna, Liu, Degao, Muchero, Wellington, Ng, Vivian, Pasha, Asher, Provart, Nicholas J, Schmutz, Jeremy, Sreedasyam, Avinash, Tuskan, Gerald A, Wang, Mei, Yang, Xiaohan, Yerramsetty, Pradeep, Zhang, Jin   +17 more
core   +2 more sources

RNA-Seq-Based WGCNA and Association Analysis Reveal the Key Regulatory Module and Genes Responding to Salt Stress in Wheat Roots

Plants
Soil salinization is the main abiotic stressor faced by crops. An improved understanding of the transcriptional response to salt stress in roots, the organ directly exposed to a high salinity environment, can inform breeding strategies to enhance ...
Jiating Chen, Lei Zhang, Yingxin Liu, Xin-Lian Shen, Yujing Guo, Xiaofei Ma, Xiaojun Zhang, Xin Li, Tianling Cheng, Huiqin Wen, Linyi Qiao, Z. Chang   +11 more
semanticscholar   +1 more source

Identification of unique transcriptomic signatures through integrated multispecies comparative analysis and WGCNA in bovine oocyte development

BMC Genomics, 2023
Background Cattle ( Bos taurus ) are a major large livestock, however, compared with other species, the transcriptional specificity of bovine oocyte development has not been emphasised.
Fali Zhang, Weidong Li, Geng Zhang, M. Zhang, Zhaolin Liu, Ke-xin Zhu, Qing-chun Liu, Shu-Er Zhang, Wei Shen, Xi-Feng Zhang   +9 more
semanticscholar   +1 more source

ACT2.6: Global Gene Coexpression Network in Arabidopsis thaliana Using WGCNA

Genes
Background/Objectives: Genes with similar expression patterns across multiple samples are considered coexpressed, and they may participate in similar biological processes or pathways. Gene coexpression networks depict the degree of similarity between the expression profiles of all genes in a set of samples.
Vasileios L. Zogopoulos, Konstantinos Papadopoulos, Apostolos Malatras, Vassiliki A. Iconomidou, Ioannis Michalopoulos   +4 more
openaire   +3 more sources

Thermal Plasticity is Regulated by a Key MicroRNA During Range Expansion of an Invasive Fruit Fly

Advanced Science, EarlyView.
Populations at the invasion front of Bactrocera dorsalis adapt through reduced phenotypic and gene expression plasticity, a phenomenon likely to be driven by genetic assimilation. We identify a key miRNA‐mediated regulatory axis, in which miR‐276b post‐transcriptionally represses thw, a conserved chitin‐binding gene critical to the cold‐tolerance ...
Yan Zhao, Juntao Hu, Juan Du, Shaokun Guo, Youming Hou, Zhihong Li   +5 more
wiley   +1 more source

The common pathophysiologic threads between Asian Indian diabetic’s ‘Thin Fat Phenotype’ and partial lipodystrophy: the peripheral adipose tissue transcriptomic evidences

Adipocyte, 2020
T2D is a complex disease with poorly understood mechanisms. In Asian Indians, it is associated with “thin fat” phenotype which resembles with partial lipodystrophy. We hypothesized that disturbed expression of lipodystrophy genes might play a role in T2D
Aditya Saxena, Pradeep Tiwari, Nitin Wahi, Anshul Kumar, Sandeep Kumar Mathur   +4 more
doaj   +1 more source

Identification Of key prognostic genes in ovarian cancer using WGCNA and LASSO analysis

All Life, 2022
Ovarian cancer (OC) is the fifth leading cause of death in females. This study aims to identify new prognostic genes of OC through bioinformatics analysis. Based on two datasets from the NCBI GEO public database, we constructed two WGCNA networks.
Zhong Yu, Ling Ouyang
doaj   +1 more source

ManiNetCluster: a novel manifold learning approach to reveal the functional links between gene networks. [PDF]

, 2019
BACKGROUND:The coordination of genomic functions is a critical and complex process across biological systems such as phenotypes or states (e.g., time, disease, organism, environmental perturbation).
Blaby, Ian K, Nguyen, Nam D, Wang, Daifeng   +2 more
core  

Gene expression in large pedigrees: analytic approaches. [PDF]

, 2016
BackgroundWe currently have the ability to quantify transcript abundance of messenger RNA (mRNA), genome-wide, using microarray technologies. Analyzing genotype, phenotype and expression data from 20 pedigrees, the members of our Genetic Analysis ...
Cantor, Rita M, Cordell, Heather J
core   +1 more source

GWAS Combined with WGCNA of Transcriptome and Metabolome to Excavate Key Candidate Genes for Rice Anaerobic Germination

Rice, 2023
Direct seeding of rice is a lightweight and simple cultivation method, which can effectively promote rice production. Anaerobic germination tolerance is one of the main traits of rice adaptability to direct seeding.
Dandan Li, Kai Liu, Chuanchao Zhao, Siyi Liang, Jing Yang, Ziai Peng, Aoyun Xia, Meng Yang, Lixin Luo, Cuihong Huang, Jiafeng Wang, Ming Huang, Wuming Xiao, Hui Wang, Ling Su, T. Guo   +15 more
semanticscholar   +1 more source