Results 181 to 190 of about 186,580 (246)

scTELL: a single-cell ATAC-seq tool for locus-specific transposable element identification in chromatin accessibility. [PDF]

Mob DNA
Jeong K, Ha H, Xing J, Choi J, Kim K.
europepmc   +1 more source

PETScan: score-based genome-wide association analysis of RNA-Seq and ATAC-Seq data. [PDF]

Bioinformatics
Hao Y, Kafri T, Zou F.
europepmc   +1 more source

Evaluating single-cell ATAC-seq atlasing technologies using sequence-to-function modeling. [PDF]

Nat Commun
Dickmänken H, Wojno M, Mahieu L, Theunis K, Ekşi EC, Christiaens V, Kempynck N, De Rop FV, Roels N, Spanier KI, Vandepoel R, Hulselmans G, Poovathingal S, Aerts S.   +13 more
europepmc   +1 more source

Integration of ATAC-seq and RNA-seq reveals temperature-responsive regulatory regions in Plasmodium falciparum asexual stages. [PDF]

Parasit Vectors
Zhang Y, Zhao Y, Zheng G, He S, Xiao J, Ma H, Huang J, Qi Y.   +7 more
europepmc   +1 more source

ChromAcS: an automated and flexible GUI for end-to-end reproducible ATAC-seq analysis across multiple species. [PDF]

BMC Bioinformatics
Hossain M, Mojumder A, Rashid SMM, Islam ABMMK.   +3 more
europepmc   +1 more source

An Integrative ATAC-Seq and RNA-Seq Analysis of Spleen Tissues from Largemouth Bass (<i>Micropterus salmoides</i>) Infected with Iridovirus (LMBV). [PDF]

Int J Mol Sci
Sun H, Hua J, Tao Y, Lu S, Wang W, Dong Y, Zhang L, He J, He J, Qiang J.   +9 more
europepmc   +1 more source

Time-course ATAC-seq and RNA-seq analysis of porcine synovium-derived mesenchymal stem cells under in vitro osteogenic induction. [PDF]

Epigenetics Chromatin
Li S, Siengdee P, Hadlich F, Trakooljul N, Oster M, Reyer H, Wimmers K, Ponsuksili S.   +7 more
europepmc   +1 more source

Integrative single-cell RNA-seq and ATAC-seq analysis reveals the key role of inflammatory cell activation in pulmonary arterial hypertension. [PDF]

Front Immunol
Yang Y, Lei Y, Wu B, Ning K, Shen Y, Wang X, He J, Zhang J, Liu C, Qin Z.   +9 more
europepmc   +1 more source

scCirclehunter delineates ecDNA-containing cells using single-cell ATAC-seq, with a focus on glioblastoma. [PDF]

Cell Discov
Jiang R, Lu Z, Li F, Zhu Y, Yang M, Zhang S, Wu P, Gong C, Fei Y, Sang Y, Huang Y, Guo JJ, Huang M.   +12 more
europepmc   +1 more source

Integrated analysis of ATAC-seq and RNA-seq reveals the TCP-ARF molecular module related to pathogenic process of phytoplasma infection in Paulownia fortunei. [PDF]

BMC Genomics
Huang S, Li B, Cao Y, Fan G.
europepmc   +1 more source