Results 61 to 70 of about 2,300 (167)

In Silico Detection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing [PDF]

, 2014
In the work presented here, we designed and developed two easy-to-use Web tools for in silico detection and characterization of whole-genome sequence (WGS) and whole-plasmid sequence data from members of the family Enterobacteriaceae.
Alessandra Carattoli, Alvarado, Aurora García-Fernández, Bonnin, Carattoli, Carattoli, Carattoli, Cottell, Couturier, DANMAP, Datta, Dolejska, Dolejska, Ea Zankari, Frank Møller Aarestrup, García-Fernández, García-Fernández, García-Fernández, García-Fernández, García-Fernández, Gilmour, Hansen, Helmuth, Henrik Hasman, Johnson, Jolley, Larsen, Laura Villa, Marchler-Bauer, Mette Voldby Larsen, Miriagou, Ole Lund, Phan, Poirel, Sherburne, Smorawinska, Villa, Villa, Villa, Villa, Woodford, Zankari, Zankari   +42 more
core   +1 more source

A prospective surveillance study to determine the prevalence of 16S rRNA methyltransferase-producing Gram-negative bacteria in the UK [PDF]

, 2021
OBJECTIVES: To determine the prevalence of 16S rRNA methyltransferase- (16S RMTase-) producing Gram-negative bacteria in patients in the UK and to identify potential risk factors for their acquisition.
Bal, AM, Balakrishnan, I, Brown, NM, Burns, P, Clark, M, Diggle, M, Donaldson, H, Eltringham, I, Folb, J, Gadsby, N, Hopkins, KL, Macleod, M, Ratnaraja, NVDV, Sriskandan, S, Taylor, E, Williams, C, Woodford, N, Wootton, M   +17 more
core   +1 more source

Complete Sequence of the IncT-Type Plasmid pT-OXA-181 Carrying the bla _OXA-181 Carbapenemase Gene from Citrobacter freundii [PDF]

Antimicrobial Agents and Chemotherapy, 2013
ABSTRACT The gene encoding the carbapenemase OXA-181 (an OXA-48 variant) was identified from a Citrobacter freundii isolate coproducing NDM-1. The whole sequence of plasmid pT-OXA-181 bearing the bla OXA-181 gene was determined and revealed a 84-kb mobilizable but non ...
Villa L, Carattoli A, Nordmann P, Carta C, Poirel L.   +4 more
openaire   +3 more sources

Characterization of an International High-Risk Escherichia coli ST410 Clone Coproducing NDM-5 and OXA-181 in a Food Market in China

Microbiology Spectrum, 2023
During a 2020 routine epidemiological investigation of carbapenem-resistant Enterobacterales at a local food market in Guangzhou, China, two Escherichia coli ST410 isolates coproducing NDM-5 and OXA-181 were obtained from environmental samples ...
Wan-Yun He, Lu-Chao Lv, Wen-Xian Pu, Guo-Long Gao, Zi-Lin Zhuang, Yao-Yao Lu, Chao Zhuo, Jian-Hua Liu   +7 more
doaj   +1 more source

Whole-genome sequencing enables molecular characterization of non-clonal group 258 high-risk clones (ST13, ST17, ST147 and ST307) among Carbapenem-resistant Klebsiella pneumoniae from a tertiary university hospital centre in Portugal [PDF]

, 2022
© 2022 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).The carbapenem ...
Bruschy Fonseca, Ana, Caneiras, Catia, Cristino, José Melo, Duarte, Aida, Lito, Luís, Mendes, Gabriel, Ramalho, João Francisco   +6 more
core   +1 more source

Possible Dissemination of Escherichia coli Sequence Type 410 Closely Related to B4/H24RxC in Ghana

Frontiers in Microbiology, 2021
Extra-intestinal pathogenic Escherichia coli (ExPEC) is one of the world’s leading causes of bloodstream infections with high mortality. Sequence type 410 (ST410) is an emerging ExPEC clone resistant to a wide range of antibiotics.
Samiratu Mahazu, Samiratu Mahazu, Isaac Prah, Isaac Prah, Alafate Ayibieke, Wakana Sato, Takaya Hayashi, Toshihiko Suzuki, Shiroh Iwanaga, Anthony Ablordey, Ryoichi Saito   +10 more
doaj   +1 more source

Outbreak of NDM-1– and OXA-181–Producing Klebsiella pneumoniae Bloodstream Infections in a Neonatal Unit, South Africa

Emerging Infectious Diseases, 2023
After an increase in carbapenem-resistant Klebsiella pneumoniae (CRKP) bloodstream infections and associated deaths in the neonatal unit of a South Africa hospital, we conducted an outbreak investigation during October 2019–February 2020 and cross ...
Rindidzani E. Magobo, Husna Ismail, Michelle Lowe, Wilhelmina Strasheim, Ruth Mogokotleng, Olga Perovic, Stanford Kwenda, Arshad Ismail, Manala Makua, Abram Bore, Rose Phayane, Harishia Naidoo, Tanya Dennis, Makhosazane Ngobese, Wim Wijnant, Nelesh P. Govender   +15 more
doaj   +1 more source

The Role of Short Journey Transportation in the Spreading of Swine Pathogens and Antimicrobial‐Resistant Bacteria

Transboundary and Emerging Diseases, Volume 2026, Issue 1, 2026.
The transport of live pigs poses a risk to on‐farm biosecurity. Trucks can carry pathogens with significant economic and health impacts, including antimicrobial‐resistant (AMR) bacteria. This study aimed to investigate the microbiological contamination of trucks before and after loading, focusing on AMR bacteria and other major pathogens transmissible ...
Marta Masserdotti, Nicoletta Formenti, Anna Donneschi, Flavia Guarneri, Federico Scali, Claudia Romeo, Enrico Giacomini, Cristina Bertasio, Maria Beatrice Boniotti, Giovanni Loris Alborali, Camilla Luzzago, Esha Saini   +11 more
wiley   +1 more source

Molecular characteristics of carbapenemase-producing Enterobacterales in the Netherlands; results of the 2014–2018 national laboratory surveillance [PDF]

, 2020
Objectives: Carbapenem resistance mediated by mobile genetic elements has emerged worldwide and has become a major public health threat. To gain insight into the molecular epidemiology of carbapenem resistance in The Netherlands, Dutch medical ...
Bakker, L.J. (L. J.), Bathoorn, E. (E.), Bernards, A.T. (Alexandra), Bode, L.G.M. (Lonneke), Bosboom, R.W. (R. W.), Bosch, T. (T.), Brauwer, E.I.G.B. (E. I G B) de, Bruins, M.J. (Marjan), Buiting, A.G.M. (Anton), Cohen Stuart, J.W.T. (James), de Haan, A. (A.), de Jong, E. (E.), Demeulemeester, A. (A.), Diederen, B.M.W. (Bram), Dijk, K.D. (Karin) van, Dinant, S. (S.), Dorigo-Zetsma, J.W., Elzakker, E. van, Frakking, F.N.J. (Florine N.), Frénay, H.M.E. (H. M.E.), Griethuysen, A. (Arjanne) van, Hees, B.C. (Babette) van, Kluytmans, J.A.J.W. (Jan), Kraan, E.M. (E. M.), Landman, F. (F.), Leversteijn-van Hall, M.A. (M. A.), Lokate, M. (M.), Man, P. (Peter) de, Maraha, B. (B.), Mattsson, E.E. (E. E.), Melles, D.C. (Damian), Muller, A.E. (Anouk), Nabuurs-Franssen, M.H. (M. H.), Notermans, D.W. (Daan), Ogtrop, M.L. van, Ott, A. (A.), Overdevest, I. (Ilse), Pontesilli, O. (O.), Renders, N. (Nicole), Reuland, A. (A.), Ridwan, B. (B.), Roescher, N. (N.), Schouls, L.M., Schülin, T. (Tanja), Sebens, F. (Fré), Silvis, W. (W.), Sinnige, J.C. (J. C.), Stals, F.S. (Frans), Trienekens, T.A.M. (T. A.M.), Trijp, M.J.C.A. (Marijke) van, van Asselt, G.J. (G. J.), van Dam, D.W. (D. W.), van den Bijllaardt, W. (Wouter), van der Linden, M.P.M. (M. P.M.), van Mens, S.P. (S. P.), van Rijn, M. (M.), van Santen, M. (M.), Visser, C.E., Vlek, A.L.M. (Anne L.M.), Waar, K. (K.), Werdmuller, B.F.M. (B. F.M.), Wertheim, H.F.L. (Heiman), Wielders, L. (L.), Wintermans, B.B. (B. B.), Witteveen, S. (S.), Wolfhagen, M.J.H.M., Zwaluw, K. (Kim) van der   +66 more
core   +1 more source

Prevalence of carbapenem resistance and its potential association with antimicrobial use in humans and animals in rural communities in Vietnam [PDF]

, 2022
Background Vietnam and Southeast Asia are hotspots for antimicrobial resistance; however, little is known on the prevalence of carriage of carbapenem resistance in non-hospitalized humans and in animals.
Campbell, James, Carrique-Mas, Juan, Dung, Nguyen Thi Thuy, Duy, Pham Thanh, Hien, Vo Be, Kiet, Bach Tuan, Larsson, Mattias, Nhung, Nguyen Thi, Olson, Linus, Phu, Doan Hoang, Quynh, Nguyen Pham Nhu, Van, Nguyen Thi Bich, Yen, Nguyen Thi Phuong   +12 more
core   +2 more sources