Arabinogalactan proteins: focus on carbohydrate active enzymes [PDF]
Frontiers in Plant Science, 2014 Arabinogalactan proteins (AGPs) are a highly diverse class of cell surface proteoglycans that are commonly found in most plant species. AGPs play important roles in many cellular processes during plant development, such as reproduction, cell ...
Eva eKnoch +3 more
doaj +5 more sources
PlantCAZyme: a database for plant carbohydrate-active enzymes [PDF]
Database, 2014 PlantCAZyme is a database built upon dbCAN (database for automated carbohydrate active enzyme annotation), aiming to provide pre-computed sequence and annotation data of carbohydrate active enzymes (CAZymes) to plant carbohydrate and bioenergy research ...
Ekstrom, Alexander +3 more
core +7 more sources
Carbohydrate‐active enzymes exemplify entropic principles in metabolism
Molecular Systems Biology, 2011 Glycans comprise ubiquitous and essential biopolymers, which usually occur as highly diverse mixtures. The myriad different structures are generated by a limited number of carbohydrate‐active enzymes (CAZymes), which are unusual in that they catalyze ...
Önder Kartal +3 more
doaj +6 more sources
Genome-Wide Comparison of Carbohydrate-Active Enzymes (CAZymes) Repertoire of Flammulina ononidis
Mycobiology, 2018 Whole-genome sequencing of Flammulina ononidis, a wood-rotting basidiomycete, was performed to identify genes associated with carbohydrate-active enzymes (CAZymes). A total of 12,586 gene structures with an average length of 2009 bp were predicted by the
Young-Jin Park, Won-Sik Kong
doaj +2 more sources
CAZac: an activity descriptor for carbohydrate-active enzymes. [PDF]
Nucleic Acids ResAbstract The Carbohydrate-Active enZYme database (CAZy; www.cazy.org) has been providing the reference classification of carbohydrate-active enzymes (CAZymes) for >30 years. Based on literature survey, the sequence-based families of CAZymes are enriched with functional data by using the International Union of Biochemistry and ...
Lombard V, Henrissat B, Garron ML.
europepmc +6 more sources
Functional Carbohydrate-Active Enzymes Acquired by Horizontal Gene Transfer from Plants in the Whitefly Bemisia tabaci [PDF]
Genome Biology and EvolutionDominique Colinet +2 more
exaly +2 more sources
The many functions of carbohydrate-active enzymes in family GH65: diversity and application [PDF]
Applied Microbiology and BiotechnologyEmma de Beul +2 more
exaly +2 more sources
The carbohydrate-active enzyme database: functions and literature [PDF]
Nucleic Acids Research, 2021 Abstract Thirty years have elapsed since the emergence of the classification of carbohydrate-active enzymes in sequence-based families that became the CAZy database over 20 years ago, freely available for browsing and download at www.cazy.org.
Drula, Elodie +5 more
openaire +5 more sources
The phenomenon of degeneration of industrial Trichoderma reesei strains
Biotechnology for Biofuels, 2021 Background Even if the loss of production capacity of a microorganism is said to be a serious problem in various biotechnology industries, reports in literature are rather rare. Strains of the genera Trichoderma reesei are used for large-scale production
R. Martzy +4 more
doaj +1 more source
A fluorescent reporter system for anaerobic thermophiles
Frontiers in Bioengineering and Biotechnology, 2023 Owing to their inherent capacity to make invisible biological processes visible and quantifiable, fluorescent reporter systems have numerous applications in biotechnology. For classical fluorescent protein systems (i.e., GFP and derivatives), chromophore
Rémi Hocq +7 more
doaj +1 more source