Results 11 to 20 of about 9,001 (100)

The Codon Statistics Database: A Database of Codon Usage Bias

open access: yesMolecular Biology and Evolution, 2022
Abstract We present the Codon Statistics Database, an online database that contains codon usage statistics for all the species with reference or representative genomes in RefSeq (over 15,000). The user can search for any species and access two sets of tables.
Krishnamurthy Subramanian   +3 more
openaire   +2 more sources

Genomic insight into pathogenicity of dematiaceous fungus Corynespora cassiicola [PDF]

open access: yesPeerJ, 2017
Corynespora cassiicola is a common plant pathogen that causes leaf spot disease in a broad range of crop, and it heavily affect rubber trees in Malaysia (Hsueh, 2011; Nghia et al., 2008).
Hong Keat Looi   +9 more
doaj   +2 more sources

Overview of tRNA Modifications in Chloroplasts

open access: yesMicroorganisms, 2022
The chloroplast is a promising platform for biotechnological innovation due to its compact translation machinery. Nucleotide modifications within a minimal set of tRNAs modulate codon–anticodon interactions that are crucial for translation efficiency ...
Maxime Fages-Lartaud   +1 more
doaj   +1 more source

Geographical distribution of Brucella melitensis inferred from rpoB gene variation

open access: yesJournal of Infection in Developing Countries, 2017
Introduction: Currently available tests have limitations for the identification of Brucella species and strains, and their genetic lineage. The genome sequence of the rpoB gene encoding the β-subunit of DNA-dependent RNA polymerase was investigated for ...
Kim-Kee Tan   +7 more
doaj   +1 more source

Mathematical model of a short translatable G-quadruplex and an assessment of its relevance to misfolding-induced proteostasis

open access: yesMathematical Biosciences and Engineering, 2020
G-quadruplexes can form in protein coding and non-coding segments such as the untranslated regions and introns of the mRNA transcript of several genes.
Siddhartha Kundu
doaj   +1 more source

Codon distributions in DNA [PDF]

open access: yesPhysical Review E, 2001
31 pages, 5 ...
Debaprasad Bandyopadhyay   +3 more
openaire   +4 more sources

An extreme codon preference strategy: codon reassignment. [PDF]

open access: yesMolecular Biology and Evolution, 1991
We argue that in animal mitochondria codon reassignments, such as those for AGA and AGG from arginine to serine or of AUA from isoleucine to methionine, are the result of an interplay between biased mutational forces and selective ones. In particular, there is a marked tendency for animal mitochondria to have very small genomes and to minimize their ...
C G Kurland, G E Andersson
openaire   +3 more sources

Candidate essential genes in Burkholderia cenocepacia J2315 identified by genome-wide TraDIS

open access: yesFrontiers in Microbiology, 2016
Burkholderia cenocepacia infection often leads to fatal cepacia syndrome in cystic fibrosis patients. However, antibiotic therapy rarely results in complete eradication of the pathogen due to its intrinsic resistance to many clinically available ...
Yee-Chin Wong   +6 more
doaj   +1 more source

Expanding codon size

open access: yeseLife, 2022
Engineering transfer RNAs to read codons consisting of four bases requires changes in tRNA that go beyond the anticodon sequence.
Tarana Siddika   +2 more
openaire   +3 more sources

Exploring Differentially Expressed Genes and Immune Modulation in Diffuse Large B-Cell Lymphoma through RNA Sequencing Analysis [PDF]

open access: yesIranian Journal of Medical Sciences
Background: Diffuse large B-cell lymphoma (DLBCL) is globally recognized as the most prevalent and aggressive subtype of non-Hodgkin lymphoma. While conventional treatments are effective initially, the disease can become resistant or relapse over time ...
Nor Adzimah Johdi   +4 more
doaj   +1 more source

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