Results 31 to 40 of about 743,722 (313)

DNA Backbone Sulfur-Modification Expands Microbial Growth Range under Multiple Stresses by its anti-oxidation function

open access: yesScientific Reports, 2017
DNA phosphorothioate (PT) modification is a sulfur modification on the backbone of DNA introduced by the proteins DndA-E. It has been detected within many bacteria isolates and metagenomic datasets, including human pathogens, and is considered to be ...
Yan Yang   +9 more
doaj   +1 more source

Computational study of associations between histone modification and protein-DNA binding in yeast genome by integrating diverse information

open access: yesBMC Genomics, 2011
Background In parallel with the quick development of high-throughput technologies, in vivo (vitro) experiments for genome-wide identification of protein-DNA interactions have been developed.
Wang Junbai
doaj   +1 more source

DNA methylation regulator-mediated modification patterns and tumor microenvironment characterization in gastric cancer

open access: yesMolecular Therapy: Nucleic Acids, 2021
Growing evidence implies a link between DNA methylation and tumor immunity/immunotherapy. However, the global influence of DNA methylation on the characteristics of the tumor microenvironment and the efficacy of immunotherapy remains to be clarified.
Qi Meng   +10 more
doaj   +1 more source

Phosphorylation events surrounding the DNA damage response in "Saccharomyces cerevisiae" [PDF]

open access: yes, 2007
Protein phosphorylation mediated by checkpoint kinases is crucial for the cellular response to DNA damage. The sensor kinases Mec1 and Tel1 initiate the checkpoint signaling cascade by directly activating the checkpoint effector kinase Rad53.
Schleker, Thomas Andreas
core   +1 more source

PCNA Ubiquitination Is Important, But Not Essential for Translesion DNA Synthesis in Mammalian Cells [PDF]

open access: yes, 2011
Translesion DNA synthesis (TLS) is a DNA damage tolerance mechanism in which specialized low-fidelity DNA polymerases bypass replication-blocking lesions, and it is usually associated with mutagenesis.
Geacintov, Nicholas E.   +47 more
core   +1 more source

Identifying DNA methylation in a nanochannel

open access: yesScience and Technology of Advanced Materials, 2016
DNA methylation is a stable epigenetic modification, which is well known to be involved in gene expression regulation. In general, however, analyzing DNA methylation requires rather time consuming processes (24–96 h) via DNA replication and protein ...
Xiaoyin Sun   +8 more
doaj   +1 more source

Functions of PARylation in DNA Damage Repair Pathways

open access: yesGenomics, Proteomics & Bioinformatics, 2016
Protein poly ADP-ribosylation (PARylation) is a widespread post-translational modification at DNA lesions, which is catalyzed by poly(ADP-ribose) polymerases (PARPs).
Huiting Wei, Xiaochun Yu
doaj   +1 more source

VEZF1 elements mediate protection from DNA methylation [PDF]

open access: yes, 2010
There is growing consensus that genome organization and long-range gene regulation involves partitioning of the genome into domains of distinct epigenetic chromatin states.
Gowher Humaira   +21 more
core   +1 more source

Calibrating catalytic DNA nanostructures for site-selective protein modification

open access: yes, 2022
Many biomedical fields rely on proteins that are selectively modified with novel chemical entities. These are often attached using reactive or catalytic moieties, but the position where these moieties are attached is often poorly controlled. In this work,
HB, Albada, Jordi, Keijzer, Han, Zuilhof
core   +1 more source

Enhanced transformation efficiency of recalcitrant Bacillus cereus and Bacillus weihenstephanensis isolates upon in vitro methylation of plasmid DNA

open access: yes, 2008
Digestion patterns of chromosomal DNAs of Bacillus cereus and Bacillus weihenstephanensis strains suggest that Sau3AI-type restriction modification systems are widely present among the isolates tested.
Abee, T.   +5 more
core   +1 more source

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