Results 21 to 30 of about 1,071,082 (162)

Ori-Finder 2022: A Comprehensive Web Server for Prediction and Analysis of Bacterial Replication Origins

open access: yesGenomics, Proteomics & Bioinformatics, 2022
The replication of DNA is a complex biological process that is essential for life. Bacterial DNA replication is initiated at genomic loci referred to as replication origins (oriCs).
Mei-Jing Dong, Hao Luo, Feng Gao
doaj   +1 more source

Escherichia coli DnaA Protein Loads a Single DnaB Helicase at a DnaA Box Hairpin [PDF]

open access: yesJournal of Biological Chemistry, 2002
The molecular engine that drives bidirectional replication fork movement from the Escherichia coli replication origin (oriC) is the replicative helicase, DnaB. At oriC, two and only two helicase molecules are loaded, one for each replication fork. DnaA participates in helicase loading; DnaC is also involved, because it must be in a complex with DnaB ...
Kevin M, Carr, Jon M, Kaguni
openaire   +2 more sources

Titration of DnaA protein by oriC DnaA‐boxes increases dnaA gene expression in Escherichia coli.

open access: yesThe EMBO Journal, 1987
Binding of the DnaA protein to its binding sites, the DnaA-boxes (TTATCCACA), was measured by a simple physiological approach. The presence of extra DnaA-boxes in growing cells leads to a derepression of dnaA gene expression, measured as beta-galactosidase activity of a dnaA-lacZ fusion polypeptide.
F G, Hansen   +3 more
openaire   +4 more sources

Putative Cooperative ATP−DnaA Binding to Double-Stranded DnaA Box and Single-Stranded DnaA-Trio Motif upon Helicobacter pylori Replication Initiation Complex Assembly

open access: yes, 2022
oriC is a region of the bacterial chromosome at which the initiator protein DnaA interacts with specific sequences, leading to DNA unwinding and the initiation of chromosome replication.
Weigel, Christoph   +6 more
core   +1 more source

Transcription termination in the Escherichia coli dnaA gene is not mediated by the internal DnaA box

open access: yesJournal of Bacteriology, 1995
DnaA protein is a DNA-binding protein which recognizes a 9-bp consensus sequence called the DnaA box. By binding to DnaA boxes, DnaA protein regulates initiation of chromosomal replication and transcription of several genes. The dnaA gene contains two DnaA boxes, one located in the regulatory region and one within the structural gene. In this paper, we
I, Pérez-Roger   +2 more
openaire   +3 more sources

Structure and Function of the Campylobacter jejuni Chromosome Replication Origin

open access: yesFrontiers in Microbiology, 2018
Campylobacter jejuni is the leading bacterial cause of foodborne infections worldwide. However, our understanding of its cell cycle is poor. We identified the probable C.
Pawel Jaworski   +5 more
doaj   +1 more source

Initiation of chromosomal replication in predatory bacterium Bdellovibrio bacteriovorus

open access: yesFrontiers in Microbiology, 2016
Bdellovibrio bacteriovorus is a small Gram-negative predatory bacterium that attacks other Gram-negative bacteria, including many animal, human, and plant pathogens.
Lukasz Makowski   +4 more
doaj   +1 more source

A Critical DnaA Box Directs the Cooperative Binding of theEscherichia coli DnaA Protein to the Plasmid RK2 Replication Origin [PDF]

open access: yesJournal of Biological Chemistry, 1999
The requirement of DnaA protein binding for plasmid RK2 replication initiation the Escherichia coli was investigated by constructing mutations in the plasmid replication origin that scrambled or deleted each of the four upstream DnaA boxes. Altered origins were analyzed for replication activity in vivo and in vitro and for binding to the E.
K S, Doran, D R, Helinski, I, Konieczny
openaire   +2 more sources

The Box VII Motif of Escherichia coli DnaA Protein Is Required for DnaA Oligomerization at the E. coli Replication Origin [PDF]

open access: yesJournal of Biological Chemistry, 2004
Escherichia coli DnaA protein initiates DNA replication from the chromosomal origin, oriC, and regulates the frequency of this process. Structure-function studies indicate that the replication initiator comprises four domains. Based on the structural similarity of Aquifex aeolicus DnaA to other AAA+ proteins that are oligomeric, it was proposed that ...
Magdalena M, Felczak, Jon M, Kaguni
openaire   +2 more sources

The presence of two DnaA-binding sequences is required for an efficient interaction of theEscherichia coliDnaA protein with each particular weak DnaA box region [PDF]

open access: yesFEMS Microbiology Letters, 1999
Using an electron microscopic method for visualizing interactions of the Escherichia coli DnaA protein with weak DnaA-binding DNA sequences, we found that DnaA binds effectively to two separated weak DnaA box regions located on the same DNA fragment. As expected, no DnaA-DNA interactions were detected when both DnaA box regions were mutagenized to the ...
Grażyna Konopa   +5 more
openaire   +2 more sources

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