Results 1 to 10 of about 88,833 (257)

Characterizing Genetic Regulatory Elements in Ovine Tissues

open access: yesFrontiers in Genetics, 2021
The Ovine Functional Annotation of Animal Genomes (FAANG) project, part of the broader livestock species FAANG initiative, aims to identify and characterize gene regulatory elements in domestic sheep.
Kimberly M. Davenport   +14 more
doaj   +3 more sources

Establishment and function of chromatin modification at enhancers [PDF]

open access: yesOpen Biology, 2020
How a single genome can give rise to distinct cell types remains a fundamental question in biology. Mammals are able to specify and maintain hundreds of cell fates by selectively activating unique subsets of their genome.
Amanuel Tafessu, Laura A. Banaszynski
doaj   +1 more source

Recent advances in high-throughput approaches to dissect enhancer function [version 1; referees: 3 approved]

open access: yesF1000Research, 2017
The regulation of gene transcription in higher eukaryotes is accomplished through the involvement of transcription start site (TSS)-proximal (promoters) and -distal (enhancers) regulatory elements.
David Santiago-Algarra   +4 more
doaj   +1 more source

Multimodal single cell analysis infers widespread enhancer co-activity in a lymphoblastoid cell line

open access: yesCommunications Biology, 2023
Non-coding regulatory elements such as enhancers are key in controlling the cell-type specificity and spatio-temporal expression of genes. To drive stable and precise gene transcription robust to genetic variation and environmental stress, genes are ...
Chaymae Ziyani   +2 more
doaj   +1 more source

Live-cell imaging reveals enhancer-dependent Sox2 transcription in the absence of enhancer proximity

open access: yeseLife, 2019
Enhancers are important regulatory elements that can control gene activity across vast genetic distances. However, the underlying nature of this regulation remains obscured because it has been difficult to observe in living cells.
Jeffrey M Alexander   +8 more
doaj   +1 more source

Identifying enhancer properties associated with genetic risk for complex traits using regulome-wide association studies.

open access: yesPLoS Computational Biology, 2022
Genetic risk for complex traits is strongly enriched in non-coding genomic regions involved in gene regulation, especially enhancers. However, we lack adequate tools to connect the characteristics of these disruptions to genetic risk.
Alex M Casella   +2 more
doaj   +1 more source

Enhancer/gene relationships: Need for more reliable genome-wide reference sets

open access: yesFrontiers in Bioinformatics, 2023
Differences in cells’ functions arise from differential activity of regulatory elements, including enhancers. Enhancers are cis-regulatory elements that cooperate with promoters through transcription factors to activate the expression of one or several ...
Tristan Hoellinger   +9 more
doaj   +1 more source

eRNA profiling uncovers the enhancer landscape of oesophageal adenocarcinoma and reveals new deregulated pathways

open access: yeseLife, 2023
Cancer is driven by both genetic and epigenetic changes that impact on gene expression profiles and the resulting tumourigenic phenotype. Enhancers are transcriptional regulatory elements that are key to our understanding of how this rewiring of gene ...
Ibrahim Ahmed   +6 more
doaj   +1 more source

AKT-mediated phosphorylation of Sox9 induces Sox10 transcription in a murine model of HER2-positive breast cancer

open access: yesBreast Cancer Research, 2021
Background Approximately 5–10% of HER2-positive breast cancers can be defined by low expression of the Ste20-like kinase, SLK, and high expression of SOX10.
Khalid N. Al-Zahrani   +5 more
doaj   +1 more source

Integrative epigenomic and high-throughput functional enhancer profiling reveals determinants of enhancer heterogeneity in gastric cancer

open access: yesGenome Medicine, 2021
Background Enhancers are distal cis-regulatory elements required for cell-specific gene expression and cell fate determination. In cancer, enhancer variation has been proposed as a major cause of inter-patient heterogeneity—however, most predicted ...
Taotao Sheng   +23 more
doaj   +1 more source

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