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The Epigenomics of Cancer [PDF]

open access: yesCell, 2007
Aberrant gene function and altered patterns of gene expression are key features of cancer. Growing evidence shows that acquired epigenetic abnormalities participate with genetic alterations to cause this dysregulation. Here, we review recent advances in understanding how epigenetic alterations participate in the earliest stages of neoplasia, including ...
Peter A Jones
exaly   +5 more sources

Epigenomics [PDF]

open access: yesGenomic Medicine, 2008
'Epigenomics' can be termed as the study of the effects of chromatin structure, including the higher order of chromatin folding and attachment to the nuclear matrix, packaging of DNA around nucleosomes, covalent modifications of histone tails and DNA methylation. This has evolved to include any process that alters gene activity without changing the DNA
Virendra S, Gomase, Somnath, Tagore
core   +7 more sources

EpiCHAOS: a metric to quantify epigenomic heterogeneity in single-cell data [PDF]

open access: yesGenome Biology
Epigenetic heterogeneity is a fundamental property of biological systems and is recognized as a potential driver of tumor plasticity and therapy resistance.
Katherine Kelly   +4 more
doaj   +2 more sources

Epigenomics in environmental health [PDF]

open access: yesFrontiers in Genetics, 2011
This review considers the emerging relationships between environmental factors and epigenetic alterations and the application of genome-wide assessments to better define these relationships.
Carmen J Marsit, Brock C Christensen
doaj   +4 more sources

Epigenomics in cancer management

open access: yesCancer Management and Research, 2010
Fabricio F CostaCancer Biology and Epigenomics Program, Children’s Memorial Research Center and Northwestern University’s Feinberg School of Medicine, 2430 N.
Fabricio F Costa
doaj   +6 more sources

Environmental Epigenomes [PDF]

open access: yesEpigenomes, 2023
Research in epigenetics has dramatically risen during the last decade to include aspects of environmental biology. However, many questions remain regarding the effects of environmental stressors on the epigenome, incorporating the particular role of epigenetic mechanisms in the adaptation and evolution of organisms in changing environments. Epigenetics
Bambarendage P. U. Perera   +1 more
openaire   +4 more sources

Neuroblastoma and the epigenome [PDF]

open access: yesCancer and Metastasis Reviews, 2021
AbstractNeuroblastoma (NB) is a pediatric cancer of the sympathetic nervous system and one of the most common solid tumors in infancy. Amplification of MYCN, copy number alterations, numerical and segmental chromosomal aberrations, mutations, and rearrangements on a handful of genes, such as ALK, ATRX, TP53, RAS/MAPK pathway genes, and TERT, are ...
Irfete S. Fetahu, Sabine Taschner-Mandl
openaire   +3 more sources

Plasma cell free DNA methylation markers for hepatocellular carcinoma surveillance in patients with cirrhosis: a case control study

open access: yesBMC Gastroenterology, 2021
Background Hepatocellular carcinoma (HCC) is the leading cause of death in patients with cirrhosis, primarily due to failed early detection. HCC screening is recommended among individuals with cirrhosis using biannual abdominal ultrasound, for earlier ...
Jörn Lewin   +13 more
doaj   +1 more source

Titration-based normalization of antibody amount improves consistency of ChIP-seq experiments

open access: yesBMC Genomics, 2023
Chromatin immunoprecipitation (ChIP) is an antibody-based approach that is frequently utilized in chromatin biology and epigenetics. The challenge in experimental variability by unpredictable nature of usable input amounts from samples and undefined ...
Ariel Caride   +11 more
doaj   +1 more source

Exploring the Ethics of Implementation of Epigenomics Technologies in Cancer Screening:A Focus Group Study [PDF]

open access: yes, 2021
New epigenomics technologies are being developed and used for the detection and prediction of various types of cancer. By allowing for timely intervention or preventive measures, epigenomics technologies show promise for public health, notably in ...
Bolt, Ineke L.L.E., Bunnik, Eline M.
core   +1 more source

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