Results 31 to 40 of about 18,119 (268)

Structural insights into DNA repair by RNase T--an exonuclease processing 3' end of structured DNA in repair pathways.

open access: yesPLoS Biology, 2014
DNA repair mechanisms are essential for preservation of genome integrity. However, it is not clear how DNA are selected and processed at broken ends by exonucleases during repair pathways.
Yu-Yuan Hsiao   +4 more
doaj   +1 more source

Translesion synthesis in mammalian cells [PDF]

open access: yes, 2006
DNA damage blocks the progression of the replication fork. In order to circumvent the damaged bases, cells employ specialized low stringency DNA polymerases, which are able to carry out translesion synthesis (TLS) past different types of damage. The five
Alan R. Lehmann   +35 more
core   +2 more sources

LTR-retrotransposons from Bdelloid rotifers capture additional ORFs shared between highly diverse retroelement types [PDF]

open access: yes, 2017
© The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Viruses 9 (2017): 78, doi:10.3390/v9040078.Rotifers of the class Bdelloidea, microscopic freshwater ...
Arkhipova, Irina R.   +2 more
core   +1 more source

ARGONAUTE10 promotes the degradation of miR165/6 through the SDN1 and SDN2 exonucleases in Arabidopsis.

open access: yesPLoS Biology, 2017
The degradation of small RNAs in plants and animals is associated with small RNA 3' truncation and 3' uridylation and thus relies on exonucleases and nucleotidyl transferases.
Yu Yu   +12 more
doaj   +1 more source

Coupling Exonuclease Digestion with Selective Chemical Labeling for Base-resolution Mapping of 5-Hydroxymethylcytosine in Genomic DNA

open access: yesBio-Protocol, 2018
This protocol is designed to obtain base-resolution information on the level of 5-hydroxymethylcytosine (5hmC) in CpGs without the need for bisulfite modification.
Aurelien Serandour   +2 more
doaj   +1 more source

One-pot making of sequence-restricted DNA dumbbells

open access: yesHeliyon, 2023
A method to build sequence-restricted DNA dumbbells was developed. 5′-exonuclease converts end sequences of DNA targets into sticky ends. Self-looping oligonucleotides with complementary 3′-overhangs are ligated to form dumbbells by DNA polymerase and ...
Ya-Hui Chang   +2 more
doaj   +1 more source

TREX1 is expressed by microglia in normal human brain and increases in regions affected by ischemia [PDF]

open access: yes, 2018
BACKGROUND: Mutations in the three-prime repair exonuclease 1 (TREX1) gene have been associated with neurological diseases, including Retinal Vasculopathy with Cerebral Leukoencephalopathy (RVCL).
Atkinson, John P   +6 more
core   +3 more sources

Cassette hybridization for vector assembly application in antibody chain shuffling

open access: yesBioTechniques, 2018
Gene assembly methods are an integral part of molecular cloning experiments. The majority of existing vector assembly methods stipulate a need for exonucleases, endonucleases and/or the use of single-stranded DNA as starting materials.
Jing Yi Lai   +3 more
doaj   +1 more source

Improving Lambda Red Genome Engineering in Escherichia coli via Rational Removal of Endogenous Nucleases [PDF]

open access: yes, 2013
Lambda Red recombineering is a powerful technique for making targeted genetic changes in bacteria. However, many applications are limited by the frequency of recombination.
Church, George McDonald   +4 more
core   +1 more source

The Conserved RNA Exonuclease Rexo5 Is Required for 3′ End Maturation of 28S rRNA, 5S rRNA, and snoRNAs

open access: yesCell Reports, 2017
Non-coding RNA biogenesis in higher eukaryotes has not been fully characterized. Here, we studied the Drosophila melanogaster Rexo5 (CG8368) protein, a metazoan-specific member of the DEDDh 3′-5′ single-stranded RNA exonucleases, by genetic, biochemical,
Stefanie Gerstberger   +8 more
doaj   +1 more source

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