Results 71 to 80 of about 227,287 (224)

High-content live-cell multiplex screen for chemogenomic compound annotation based on nuclear morphology

open access: yesSTAR Protocols, 2022
Summary: Well-characterized small molecules enable the study of cell processes and facilitate target validation. Here, we describe a high-content multiplex screen to investigate cell viability over 48 h, which can be combined with investigating ...
Amelie Tjaden   +4 more
doaj  

Quantification of drug-induced fractional killing using high-throughput microscopy

open access: yesSTAR Protocols, 2021
Summary: Anti-cancer drugs kill only a fraction of cells within a population at any given time. Here, we describe a protocol to quantify drug-induced fractional killing over time using high-throughput imaging.
Zintis Inde   +2 more
doaj  

Moving microfluidics ahead: Extending capabilities, accessibility, and applications [PDF]

open access: yesarXiv, 2018
Paul Blainey is professor of Biological Engineering at MIT. In this contribution he describes three microfluidic technologies that he and his team has developed to extend the capability, accessibility, and applications of microfluidics: (1) Integrated microfluidic sample preparation for genomic assays, (2) hydrogel-based microfluidics for single-cell ...
arxiv  

Quantify permeability using on-a-chip models in high-throughput applications

open access: yesSTAR Protocols, 2023
Summary: Traditionally, to quantify permeability of a biological barrier, the initial slope is used, based on the assumption of sink condition (concentration of the donor is constant, and the receiver increases less than 10%).
Camilla Soragni   +7 more
doaj  

Newborn Screening Quality Assurance Program for CFTR Mutation Detection and Gene Sequencing to Identify Cystic Fibrosis

open access: yesJournal of Inborn Errors of Metabolism and Screening, 2016
All newborn screening laboratories in the United States and many worldwide screen for cystic fibrosis. Most laboratories use a second-tier genotyping assay to identify a panel of mutations in the CF transmembrane regulator ( CFTR ) gene.
Miyono M. Hendrix MS   +2 more
doaj   +1 more source

Analytics for metabolic engineering

open access: yesFrontiers in Bioengineering and Biotechnology, 2015
Realizing the promise of metabolic engineering has been slowed by challenges related to moving beyond proof-of-concept examples to robust and economically viable systems. Key to advancing metabolic engineering beyond trial-and-error research is access to
Christopher J Petzold   +4 more
doaj   +1 more source

High-throughput drug screening of fine-needle aspiration-derived cancer organoids

open access: yesSTAR Protocols, 2020
Summary: Generation of fine-needle aspiration (FNA)-derived cancer organoids has allowed us to develop a number of downstream applications. In this protocol, we start with organoids cultured in a semi-solid format.
Kensey Bergdorf   +7 more
doaj  

High-throughput screening of histone deacetylases and determination of kinetic parameters using fluorogenic assays

open access: yesSTAR Protocols, 2021
Summary: Histone deacetylases (HDACs) are ubiquitous enzymes that cleave post-translational ε-N-acyllysine modifications. The continued identification of diverse acyl modifications at lysine residues in proteins has resulted in discovery of new insight ...
Carlos Moreno-Yruela, Christian A. Olsen
doaj  

Efficient pooling designs for library screening [PDF]

open access: yesarXiv, 1994
We describe efficient methods for screening clone libraries, based on pooling schemes which we call ``random $k$-sets designs''. In these designs, the pools in which any clone occurs are equally likely to be any possible selection of $k$ from the $v$ pools. The values of $k$ and $v$ can be chosen to optimize desirable properties.
arxiv  

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