Results 41 to 50 of about 194,990 (329)

Identification of the prognostic biomarkers and their correlations with immune infiltration in colorectal cancer through bioinformatics analysis and in vitro experiments

open access: yesHeliyon, 2023
Colorectal cancer (CRC) is the third most diagnosed malignancy and the second leading cause of cancer death. The objective was to identify novel hub genes that were helpful for prognosis and targeted therapy in CRC. GSE23878, GSE24514, GSE41657, GSE81582
Min Guo, Xiaxi Li, Jiong Li, Baolong Li
doaj   +1 more source

Analysis of multiple databases identifies crucial genes correlated with prognosis of hepatocellular carcinoma

open access: yesScientific Reports, 2022
Despite advancements made in the therapeutic strategies on hepatocellular carcinoma (HCC), the survival rate of HCC patient is not satisfactory enough. Therefore, there is an urgent need for the valuable prognostic biomarkers in HCC therapy.
Zhifeng Lin   +5 more
doaj   +1 more source

Nuclear pore complexes as hubs for gene regulation [PDF]

open access: yesNucleus, 2018
Nuclear pore complexes (NPCs), the channels connecting the nucleus with the cytoplasm, are the largest protein structures of the nuclear envelope. In addition to their role in regulating nucleocytoplasmic transport, increasing evidence shows that these multiprotein structures play central roles in the regulation of gene activity.
openaire   +2 more sources

One Hub-One Process: A Tool Based View on Regulatory Network Topology [PDF]

open access: yes, 2007
The relationship between the regulatory design and the functionality of molecular networks is a key issue in biology. Modules and motifs have been associated to various cellular processes, thereby providing anecdotal evidence for performance based ...
Axelsen, Jacob Bock   +2 more
core   +4 more sources

Identification of novel potential biomarkers in infantile hemangioma via weighted gene co-expression network analysis

open access: yesBMC Pediatrics, 2022
Background Infantile hemangioma (IH) is the most common benign tumor in children and is characterized by endothelial cells proliferation and angiogenesis. Some hub genes may play a critical role in angiogenesis. This study aimed to identify the hub genes
Bin Xie, Xiongming Zhou, Jiaxuan Qiu
doaj   +1 more source

Key genes and regulatory networks for diabetic retinopathy based on hypoxia-related genes: a bioinformatics analysis [PDF]

open access: yesInternational Journal of Ophthalmology
AIM: To prevent neovascularization in diabetic retinopathy (DR) patients and partially control disease progression. METHODS: Hypoxia-related differentially expressed genes (DEGs) were identified from the GSE60436 and GSE102485 datasets, followed by gene ...
Cai-Han Yu   +5 more
doaj   +1 more source

Co-expression Network Analysis Reveals Novel Genes Underlying Alzheimer’s Disease Pathogenesis

open access: yesFrontiers in Aging Neuroscience, 2020
Background: The pathogenesis of Alzheimer’s disease (AD) remains to be elucidated. This study aimed to identify the hub genes in AD pathogenesis and determine their functions and pathways.Methods: A co-expression network for an AD gene dataset with 401 ...
Rui-ting Hu   +6 more
doaj   +1 more source

Integrated analysis of hub genes and miRNA- transcription factor-hub gene interaction network in necrotizing enterocolitis

open access: yes, 2023
Abstract Background The aim of this study was to identify hub genes, related transcription factors (TFs) and miRNAs from the miRNA–TF–gene interaction network in necrotizing enterocolitis (NEC). Methods Three expression data sets from GEO database that compared NEC with surgical negative controls were used to calculate differentially ...
Yuqian Su   +6 more
openaire   +1 more source

Examination of the relationship between essential genes in PPI network and hub proteins in reverse nearest neighbor topology [PDF]

open access: yes, 2010
Background In many protein-protein interaction (PPI) networks, densely connected hub proteins are more likely to be essential proteins. This is referred to as the "centrality-lethality rule", which indicates that the topological placement of a protein in
Leong, Hon Wai   +4 more
core   +5 more sources

Integrative single-cell RNA sequencing and metabolomics decipher the imbalanced lipid-metabolism in maladaptive immune responses during sepsis

open access: yesFrontiers in Immunology, 2023
BackgroundTo identify differentially expressed lipid metabolism-related genes (DE-LMRGs) responsible for immune dysfunction in sepsis.MethodsThe lipid metabolism-related hub genes were screened using machine learning algorithms, and the immune cell ...
Han She   +18 more
doaj   +1 more source

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