Results 41 to 50 of about 92,631 (141)

Bacterial diversity and community in Qula from the Qinghai–Tibetan Plateau in China [PDF]

open access: yesPeerJ, 2018
Qula is a cheese-like product usually prepared with unpasteurized yak milk under open conditions, with both endogenous and exogenous microorganisms involved in the fermentation process.
Yan Zhu   +7 more
doaj   +2 more sources

Ambiguous results of the HLA-DPB1 genotyping results: Based on AllType NGS 11-loci sequencing reagent

open access: yesZhongguo shuxue zazhi, 2023
Objective To statistically analyze the characteristics of ambiguous results of HLA-DPB1 genotyping given by AllType NGS 11-loci sequencing reagent via two next generation sequencing platforms, i. e. Ion Torrent S5 and Illumina Miseq.
Lina DONG   +5 more
doaj   +1 more source

Systematic Comparison of Nanopore and Illumina Sequencing for the Detection of Plant Viruses and Viroids Using Total RNA Sequencing Approach

open access: yesFrontiers in Microbiology, 2022
High-throughput sequencing (HTS) has become an important tool for plant virus detection and discovery. Nanopore sequencing has been rapidly developing in the recent years and offers new possibilities for fast diagnostic applications of HTS.
Anja Pecman   +7 more
doaj   +1 more source

Sample Preparation for Illumina MiSeq Dual Index Amplicon Sequencing v1 [PDF]

open access: yes, 2019
Amplicon sequencing sample preparation for bacteria and microeukaryotes
Máté Vass, Anna Székely
openaire   +2 more sources

Microbial Community of Tannery Wastewater Involved in Nitrification Revealed by Illumina MiSeq Sequencing

open access: yesJournal of Microbiology and Biotechnology, 2018
The aim of this study was to investigate the microbial community of three tannery wastewater treatment plants (WWTPs) involved in nitrification by Illumina MiSeq sequencing. The results showed that highly diverse communities were present in tannery wastewater.
Xiaojian, Ma   +4 more
openaire   +3 more sources

Advancing molecular macrobenthos biodiversity monitoring: a comparison between Oxford Nanopore and Illumina based metabarcoding and metagenomics [PDF]

open access: yesPeerJ
DNA-based methods and developments of sequencing technologies are integral to macrobenthos biodiversity studies, and their implementation as standardized monitoring methods is approaching.
Karlijn Doorenspleet   +8 more
doaj   +2 more sources

Gender dependent gut microbiome in obese Egyptian individuals [PDF]

open access: yesRecords of Pharmaceutical & Biomedical Sciences, 2019
The majority of human microbiota resides in the GIT approximately 3.6 x 1013. Identification of gut microbiota composition in obese individuals and defining bacterial community differences between men and females help in the treatment of certain ...
Mohammed Ali
doaj   +1 more source

Clinical metagenomic sequencing - CSF RNA and DNA Illumina MiSeq v1

open access: yes, 2022
This protocol was developed to evaluate unbiased cerebrospinal fluid metagenomics at a referral centre in South Africa. Commercial kit protocols are generally used unmodified and limited use of in-house developed methods or reagents is made. This maintains the simplicity and accessibility of the protocol which can serve as a base for evaluation of ...
Gert Marais   +8 more
openaire   +1 more source

Massively parallel multiplex DNA sequencing for specimen identification using an Illumina MiSeq platform [PDF]

open access: yesScientific Reports, 2015
AbstractGenetic information is a valuable component of biosystematics, especially specimen identification through the use of species-specific DNA barcodes. Although many genomics applications have shifted to High-Throughput Sequencing (HTS) or Next-Generation Sequencing (NGS) technologies, sample identification (e.g., via DNA barcoding) is still most ...
Shadi Shokralla   +7 more
openaire   +2 more sources

Comparative next-generation sequencing of adeno-associated virus inverted terminal repeats

open access: yesBioTechniques, 2014
The inverted terminal repeats (ITRs) of adeno-associated virus (AAV) are notoriously difficult to sequence owing to their high GC-content (70%) and palindromic sequences that result in the formation of a very stable, 125 bp long, T-shaped hairpin ...
Karl Petri   +7 more
doaj   +1 more source

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