Results 91 to 100 of about 11,169 (113)

Model-based sequential base calling for Illumina sequencing

2010 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS), 2010
In this paper, we study the efficacy of a model-based base-calling approach for Illumina's sequencing platforms. In particular, we investigate Genome Analyzer I reads and provide a detailed biochemical model of the sequencing process, incorporating various non-idealities evident in such systems.
Shreepriya Das, Haris Vikalo, Arjang Hassibi   +2 more
openaire   +1 more source

Genome Sequencing of Steroid-Producing Bacteria with Illumina Technology

2017
Illumina technology is widely used for bacterial whole-genome sequencing due to its simplicity, cheapness, reliability, and abundant software for manipulation with raw data. Illumina technology belongs to a second generation of whole genome sequencing that yields great amount of short reads for genome regions. Genomic DNA is fragmented to short pieces.
Victoria Y, Shtratnikova, Mikhail I, Schelkunov, Marina V, Donova   +2 more
openaire   +2 more sources

Small RNA Library Preparation and Illumina Sequencing in Plants

2016
The discovery of small RNAs in plants and animals almost two decades ago attracted a significant interest towards epigenetic regulation of gene expression and the practical implementation of the gained knowledge in applied studies. New and sometimes unexpected functions have been ascribed to sRNAs almost every couple of years since their discovery ...
Andriy, Bilichak, Andrey, Golubov, Igor, Kovalchuk   +2 more
openaire   +2 more sources

Illumina sequencing

2023
openaire   +1 more source

Clinical value of metagenomic next-generation sequencing by Illumina and Nanopore for the detection of pathogens in bronchoalveolar lavage fluid in suspected community-acquired pneumonia patients

Frontiers in Cellular and Infection Microbiology, 2022
Yubao Chen, Yang Zhenhua
exaly  

Comparison of Illumina versus Nanopore 16S rRNA Gene Sequencing of the Human Nasal Microbiota

Genes, 2020
Astrid P Heikema, Stefan A Boers, Saskia Hiltemann   +2 more
exaly  

Illumina MiSeq sequencing reveals microbial community succession in salted peppers with different salinity during preservation

Food Research International, 2021
Hui Zhou, Rongrong Wang, Pao Li
exaly  

Bacterial community compositions of coking wastewater treatment plants in steel industry revealed by Illumina high-throughput sequencing

Bioresource Technology, 2015
Qiao Ma, Yuanyuan Qu, Wenli Shen
exaly  

A 16S rRNA gene sequencing and analysis protocol for the Illumina MiniSeq platform

MicrobiologyOpen, 2018
Ömer K Coşkun, Nicola Conci, Gert Wörheide   +2 more
exaly  

Comparison of the sequencing bias of currently available library preparation kits for Illumina sequencing of bacterial genomes and metagenomes

DNA Research, 2019
Mitsuhiko P Sato, Yoshitoshi Ogura, Keiji Nakamura   +2 more
exaly