Results 21 to 30 of about 773,035 (293)

Palidis: fast discovery of novel insertion sequences [PDF]

open access: yesMicrobial Genomics, 2022
AbstractThe diversity of microbial insertion sequences, crucial mobile genetic elements in generating diversity in microbial genomes, needs to be better represented in current microbial databases. Identification of these sequences in microbiome communities presents some significant problems that have led to their underrepresentation. Here, we present a
Carr, Victoria R.   +5 more
openaire   +7 more sources

Comparative Genome Analysis of an Extensively Drug-Resistant Isolate of Avian Sequence Type 167 Escherichia coli Strain Sanji with Novel In Silico Serotype O89b:H9

open access: yesmSystems, 2019
Extensive drug resistance (XDR) is an escalating global problem. Escherichia coli strain Sanji was isolated from an outbreak of pheasant colibacillosis in Fujian province, China, in 2011.
Xiancheng Zeng   +9 more
doaj   +3 more sources

Relationship Between Avirulence Gene (avrA) Diversity in Ralstonia solanacearum and Bacterial Wilt Incidence

open access: yesMolecular Plant-Microbe Interactions, 2004
Bacterial wilt, caused by Ralstonia solanacearum, is a serious disease of tobacco in North and South Carolina. In contrast, the disease rarely occurs on tobacco in Georgia and Florida, although bacterial wilt is a common problem on tomato.
Alison E. Robertson   +4 more
doaj   +1 more source

Insertion sequence distribution bias in Archaea [PDF]

open access: yesMobile Genetic Elements, 2014
Insertion sequences (IS) are common transposable elements in Archaea. Intergenic IS elements are usually less harmful than intragenic ISs, simply because they are less likely to disrupt host gene function. However, because regulatory sequences are intergenic and upstream of genes, we hypothesized that not all intergenic regions are selectively ...
Morgan C, Florek   +2 more
openaire   +2 more sources

A Receptor Component of the Chloroplast Protein Translocation Machinery [PDF]

open access: yes, 1994
The chloroplast outer envelope protein OEP86 functions as a receptor in precursor protein translocation into chloroplasts. Sequence analysis suggests that the precursor of OEP86 is directed to the chloroplast outer envelope by a cleavable, negatively ...
Heemeyer, Frank   +4 more
core   +1 more source

An age-of-allele test of neutrality for transposable element insertions [PDF]

open access: yes, 2013
How natural selection acts to limit the proliferation of transposable elements (TEs) in genomes has been of interest to evolutionary biologists for many years.
Bergman, Casey M.   +3 more
core   +2 more sources

Early steps in mitochondrial protein import [PDF]

open access: yes, 1990
The process of insertion of precursor proteins into mitochondrial membranes was investigated using a hybrid protein (pSc1-c) that contains dual targeting information and, at the same time, membrane insertion activity.
Neupert, Walter   +2 more
core   +1 more source

Detecting rare structural variation in evolving microbial populations from new sequence junctions using breseq

open access: yesFrontiers in Genetics, 2015
New mutations leading to structural variation (SV) in genomes — in the form of mobile element insertions, large deletions, gene duplications, and other chromosomal rearrangements — can play a key role in microbial evolution.
Daniel E Deatherage   +3 more
doaj   +1 more source

U-insertion/deletion Edited Sequence Database [PDF]

open access: yesNucleic Acids Research, 1998
Uridine insertion/deletion RNA editing is a post-transcriptional RNA modification occurring in the mitochondria of kinetoplastid protozoa. The U-insertion/deletion Edited Sequence Database is a compilation of mitochondrial genes and edited mRNAs from five kinetoplastid species.
L, Simpson   +5 more
openaire   +2 more sources

Fast Dynamic Arrays [PDF]

open access: yes, 2017
We present a highly optimized implementation of tiered vectors, a data structure for maintaining a sequence of $n$ elements supporting access in time $O(1)$ and insertion and deletion in time $O(n^\epsilon)$ for $\epsilon > 0$ while using $o(n)$ extra ...
Bille, Philip   +3 more
core   +2 more sources

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