Results 71 to 80 of about 743,554 (284)

JXing-Lab/nanopore-sv-evaluation: Code and data

, 2019
This release contains codes and data used for the publication "Evaluating nanopore sequencing data processing pipelines for structure variation identification".
Xing Lab of Genomics
core   +1 more source

Nanoconfinement‐Induced Second‐Harmonic Circular Dichroism via Chirality–Ferroelectric Coupling

Advanced Functional Materials, EarlyView.
Nanoconfinement of a ferroelectric nematic liquid crystal within a chiral nanoporous sponge yields an enhanced second‐harmonic generation circular dichroism (|gSHG–CD| ≈ 1.1). Polarization‐resolved analysis suggests an additional magnetic‐dipole‐associated nonlinear contribution under nanoconfinement, highlighting chirality–ferroelectric coupling as a ...
Jae‐Jin Lee, Hiroya Nishikawa, Tae‐Woong Moon, Dong‐Ha Kim, Fumito Araoka, Suk‐Won Choi   +5 more
wiley   +1 more source

A comparison of methods for detecting DNA methylation from long-read sequencing of human genomes

Genome Biology
Background Long-read sequencing can enable the detection of base modifications, such as CpG methylation, in single molecules of DNA. The most commonly used methods for long-read sequencing are nanopore developed by Oxford Nanopore Technologies (ONT) and ...
Brynja D. Sigurpalsdottir, Olafur A. Stefansson, Guillaume Holley, Doruk Beyter, Florian Zink, Marteinn Þ. Hardarson, Sverrir Þ. Sverrisson, Nina Kristinsdottir, Droplaug N. Magnusdottir, Olafur Þ. Magnusson, Daniel F. Gudbjartsson, Bjarni V. Halldorsson, Kari Stefansson   +12 more
doaj   +1 more source

Nanopore sequencing of cerebrospinal fluid of three patients with cryptococcal meningitis

European Journal of Medical Research, 2022
Background Cryptococcal meningitis (CM) has a high morbidity and mortality due to the low detection of Cryptococcus in cerebrospinal fluid (CSF) during the early stage of the disease with traditional methods.
Ke Jin, Xiaojuan Wang, Lingzhi Qin, Yazhen Jia, Keke Zhou, Yusu Jiang, Milan Zhang, Tao Zhang, Mengge Zhang, Weifeng Ma, Lin Jia, Yongshi Teng, Shuhua Dai, Wei li   +13 more
doaj   +1 more source

Rapid Nanopore Sequencing to Identify Bacteria Causing Prosthetic Joint Infections

Background/Objectives: The diagnosis of prosthetic joint infection remains difficult. Microbiological cultures frequently have false-positive and false-negative results.
Charlotte Hulme, Cool, Paul, Hollie Wilkinson, Hulme, Charlotte, Wright, Karina, Perry, Jade, Niall Steele, Townsend, Rob, McCarthy, Helen S., Rob Townsend, Helen S. McCarthy, Steele, Niall, Jade Perry, Wilkinson, Hollie, Benjamin Burston, Burston, Benjamin, Karina Wright, Paul Cool   +17 more
core   +1 more source

Microfluidic Nano‐Assembly of Red‐Blood‐Cell (RBC) Lipids and Components for Engineering Extracellular Vesicles

Advanced Healthcare Materials, EarlyView.
Engineered red blood cell‐derived extracellular vesicles (eRBCEVs) are synthesized via controlled microfluidic assembly from native RBC lipids, enabling tunable encapsulation of proteins, nucleic acids, nanoparticles, and viral vectors. The platform demonstrates reproducible nanoscale architecture, preserved membrane composition, and functional cargo ...
Chiranth K. Nagaraj, Xilal Y. Rima, Kim T. Nguyen, Courtney Culkins, Nana Boateng, Jacob Doon‐Ralls, Alejandro Bresolin, Xin Huang, Hong Li, Vahedi Amid, Ajeet Pal Singh, Dharti Shantaram, Anastasiia Amari, Mangesh D. Hade, Nicholas R. Merriam, Zachary D. Schultz, Scott Q. Harper, Nizar Y. Saad, Setty M. Magaña, Willa A. Hsueh, Rachel E. Kopec, Blaise R. Kimmel, Andre F. Palmer, Eduardo Reátegui   +23 more
wiley   +1 more source

Primed and ready: nanopore metabarcoding can now recover highly accurate consensus barcodes that are generally indel-free

BMC Genomics
Background DNA metabarcoding applies high-throughput sequencing approaches to generate numerous DNA barcodes from mixed sample pools for mass species identification and community characterisation.
Jia Jin Marc Chang, Yin Cheong Aden Ip, Wan Lin Neo, Maxine A. D. Mowe, Zeehan Jaafar, Danwei Huang   +5 more
doaj   +1 more source

Solid-state nanopore sensors for nucleic acid analysis [PDF]

, 2011
Nanopore DNA analysis is an emerging technique that involves electrophoretically driving DNA molecules through a nano-scale pore in solution and monitoring the corresponding change in ionic pore current.
Venkatesan, Bala Murali K.
core  

How is Nanoarchitectonics Shaping Extracellular Vesicle Research?

Advanced Healthcare Materials, EarlyView.
The convergence of nanoarchitectonics and extracellular vesicle biology is reshaping next‐generation nanomedicine by enabling rationally designed nanostructures for enhanced EVs detection, engineering, and therapy. ABSTRACT Extracellular vesicles (EVs) have gained recognition as crucial mediators of cell‐to‐cell communication, holding immense potential
Madushani Dahanayake, Md Shahriar A. Hossain, Chia‐Hung Liu, Carlos Salomon, Yusuke Yamauchi, Mostafa Kamal Masud   +5 more
wiley   +1 more source

Air monitoring by nanopore sequencing

ISME Communications
Abstract While the air microbiome and its diversity are essential for human health and ecosystem resilience, comprehensive air microbial diversity monitoring has remained rare, so that little is known about the air microbiome’s composition, distribution, or functionality.
Reska, T.T.M., Pozdniakova, S., Borràs, S., Perlas Puente,A., Sauerborn, E., Cañas, L., Schloter, M., Rodó, X., Wang, Y., Winkler, J.B., Schnitzler, J.-P., Urban, L.   +11 more
openaire   +3 more sources