Sensitive, flexible, and affordable serum RNA sequencing for pathogen detection on the Oxford Nanopore platform. [PDF]
Selhorst P +4 more
europepmc +1 more source
Advances in genomic, proteomic, and transcriptomic technologies are transforming the diagnosis of genetic myopathies. When integrated with traditional muscle pathology, multi‐omics approaches improve diagnostic yield, clarify disease mechanisms, and support more precise, mechanism‐based therapeutic strategies for patients with neuromuscular disorders ...
Ludmila Alem +2 more
wiley +1 more source
Salt Stress Adaptations in Soybean Involve Alterations in Pre‐mRNA Processing
ABSTRACT Salt stress can seriously affect plant survival. To adapt to salt stress, plants can alter gene expressions and/or pre‐mRNA processing patterns, or both. Previous studies could not comprehensively profile stress‐responsive pre‐mRNA processing patterns due to limitations in traditional sequencing technologies.
Shoudong Zhang +9 more
wiley +1 more source
Identification of a novel HLA-G allele, HLA-G*01:66, using PolyseqOne and oxford nanopore sequencing. [PDF]
Li R, Sun L, Cai S.
europepmc +1 more source
Distinguishing proliferative nodules from melanoma in congenital melanocytic nevi remains challenging. While aCGH, sWGS, and methylation sequencing show high concordance for broad CNAs, higher‐resolution methods detect additional focal alterations that can lead to discordant classifications.
Anton Karelin +12 more
wiley +1 more source
Evaluation of Oxford Nanopore Technologies workflows for genomic epidemiology of outbreak-associated bacterial isolates in the clinical setting. [PDF]
Neuenschwander S +5 more
europepmc +1 more source
Progress and Challenges in Phylogenomics and Genomics of Lophotrochozoa/Spiralia
ABSTRACT Lophotrochozoa is one of the three major bilaterian groups comprising more than half of the bilaterian phyla. Lophotrochozoa includes among others Mollusca, Annelida, Platyhelminthes and Rotifera. Despite representing such a large proportion of animal diversity, they are historically understudied and genomic resources have been scarce. However,
Torsten H. Struck
wiley +1 more source
Identification of pathogenic fungi causing ocular infections using full rRNA operon sequencing with Oxford Nanopore Technologies. [PDF]
Suwannasaeng T +11 more
europepmc +1 more source
Direct RNA sequencing of primary human valvular interstitial cells (VICs) from non‐calcified control and fibro‐calcific aortic stenosis (AS) valves reveals disease‐associated remodeling of m6A RNA methylation. AS‐derived VICs show an overall increase in detected m6A sites, together with transcript‐specific hyper‐ and hypo‐methylation patterns ...
Vincenza Valerio +6 more
wiley +1 more source
Snappy: fast identification of DNA methylation motifs based on oxford nanopore reads. [PDF]
Konanov DN +3 more
europepmc +1 more source

