Results 201 to 210 of about 33,843 (263)

Rapid Sequence Identification of Foot-and-Mouth Disease Virus Utilizing FMDV-ONTAPS: The Oxford Nanopore Technologies Amplicon P1 Sequencing Protocol. [PDF]

Viruses
Yeo S, Hole K, Chestley T, Seo GE, Majer A, Handel K, Nebroski M, Lung O, Nfon C, Babiuk S.   +9 more
europepmc   +1 more source

First whole-genome assembly of the Galápagos Petrel (Pterodroma phaeopygia) using Oxford Nanopore sequencing to advance conservation genomics in a critically endangered seabird. [PDF]

G3 (Bethesda)
Sessi IR, Henderson JB, Martin JA, Skehel A, Pozo G, Guillén Alcides JA, de Ferran V, Dumbacher JP, Chaves JA.   +8 more
europepmc   +1 more source

Training Recurrent Neural Networks for BrdU Detection with Oxford Nanopore Sequencing: Guidance and Lessons Learned. [PDF]

Genes (Basel)
Liu H, Flavahan W, Zhu LJ.
europepmc   +1 more source

Characterizing the Bacterial Microbiome of the Invasive Vector <i>Aedes albopictus</i> in Hungary: A Pilot Study Using Oxford Nanopore Sequencing. [PDF]

Int J Microbiol
Kurucz K, Philippe C, Ábrahám Á, Kratou M, Piloto-Sardiñas E, Obregon D, Abuin-Denis L, Kovács-Valasek A, Cabezas-Cruz A.   +8 more
europepmc   +1 more source

Genome‐Wide In Silico Analysis of the Type VI Secretion System (T6SS) Within the Morganella Genus

MicrobiologyOpen, Volume 15, Issue 3, June 2026.
▪ Species‐specific T6SS patterns among Morganella genus (M. morganii and M. sibonii). ▪ Only one‐third of M. morganii isolates haboured a T6SS. ▪ All M. sibonii possess four T6SS clusters. ▪ M. sibonii exhibited a wide diversity of effectors compared to M. morganii.
Mathilde Duque, Aymeric Jacquemin, Delphine Girlich, Rémy A. Bonnin, Laurent Dortet   +4 more
wiley   +1 more source

Oxford nanopore sequencing as a useful tool for investigating the population dynamics of invasive begomoviruses in Sicily. [PDF]

Microb Genom
Bertacca S, Rotunno S, Frascati F, Noris E, Accotto GP, Davino S, Miozzi L, Vaira AM.   +7 more
europepmc   +1 more source

Emerging Dissemination of blaCTX‐M‐65 in Bovine E. coli in Spain Associated With IncHI2 Plasmids

MicrobiologyOpen, Volume 15, Issue 3, June 2026.
The resistome in ESBL/AmpC‐producing E. coli in livestock was diverse and dominated by plasmid‐borne genes Detection of host‐independent dissemination of AMR determinants mediated by shared plasmid types First report in Spanish cattle of blaCTX‐M‐65 on IncHI2 plasmids, an under‐reported ESBL in Europe Identification of potentially zoonotic clones in ...
Medelin Ocejo, Beatriz Oporto, Ana Hurtado   +2 more
wiley   +1 more source

scnanoseq: an nf-core pipeline for Oxford Nanopore single-cell RNA-sequencing. [PDF]

Bioinformatics
Trull A, Worthey EA, Ianov L.
europepmc   +1 more source

A Complete Genome Resource and Bio‐Control Activity of Soil‐Isolated Pseudomonas citronellolis Strain M03 Against Onion‐Pathogenic Burkholderia Species

MicrobiologyOpen, Volume 15, Issue 3, June 2026.
Pseudomonas citronellolis M03, isolated from field soil, was sequenced and its genome revealed ten biosynthetic clusters, including siderophore NRPS. Phenotypic assays showed strong antagonism against onion‐pathogenic Burkholderia spp., reducing B.
Kephas Mphande, Michelle Pena MacLellan, Anoop Anand Malik, Bhabesh Dutta   +3 more
wiley   +1 more source

Resolving haplotypes of the glucose-6-phosphate dehydrogenase gene using long-range polymerase chain reaction and Oxford Nanopore sequencing. [PDF]

Biol Methods Protoc
Chamchoy K, Jacob BAC, Boonyuen U.
europepmc   +1 more source