Results 241 to 250 of about 25,431 (290)

A Comparative Full-Length Transcriptome Analysis Using Oxford Nanopore Technologies (ONT) in Four Tissues of Bovine Origin. [PDF]

Animals (Basel)
Liu X, Wu J, Li M, Zuo F, Zhang G.
europepmc   +1 more source

Magnipore: Prediction of differential single nucleotide changes in the Oxford Nanopore Technologies sequencing signal of SARS-CoV-2 samples

, 2023
Spangenberg J, zu Siederdissen CH, Žarković M, Triebel S, Rose R, Christophersen CM, Paltzow L, Hegab MM, Wansorra A, Srivastava A, Krumbholz A, Marz M.   +11 more
europepmc   +1 more source

Integrative genomic analyses reveal candidate genes for the Ur‐3 and Ur‐7 rust resistance loci in common bean

The Plant Genome, Volume 19, Issue 2, June 2026.
Abstract Bean rust, caused by Uromyces appendiculatus, severely limits the productivity of common bean (Phaseolus vulgaris L.), an essential source of protein and micronutrients in human diets worldwide. Durable disease management relies primarily on host resistance; however, the molecular architecture of several key rust resistance loci remains ...
Alvaro Soler‐Garzón, Giseli Valentini, Marcial Pastor‐Corrales, Ruifeng He, Phillip N. Miklas   +4 more
wiley   +1 more source

R2C2 + UMI: Combining concatemeric and unique molecular identifier-based consensus sequencing enables ultra-accurate sequencing of amplicons on Oxford Nanopore Technologies sequencers. [PDF]

PNAS Nexus
Deng DZQ, Verhage J, Neudorf C, Corbett-Detig R, Mekonen H, Castaldi PJ, Vollmers C.   +6 more
europepmc   +1 more source

Kineochelins—A New Group of Siderophores From an Antarctic Bacterium

Microbial Biotechnology, Volume 19, Issue 6, June 2026.
Genome‐guided analysis of an Antarctic Actinokineospora strain led to the discovery of kineochelins, a new group of siderophores involved in iron sequestration and microbial competition. Kineochelin production inhibits co‐occurring bacteria and clinically relevant yeasts, highlighting Antarctic microorganisms as promising sources of bioactive natural ...
Stanislava Kralova, Peter Spacek, Johannes Gafriller, Matej Bezdicek, Viktoria Medvedcova, Joana Séneca, Jay Osvatic, Ulrike Grienke, Thomas Rattei, Olga N. Sekurova, Sergey B. Zotchev, Martin Zehl, Alexander Loy   +12 more
wiley   +1 more source

Complete genome sequence of a nucleopolyhedrovirus isolated from Bombyx mori in Hakozaki, Japan, obtained using Oxford Nanopore Technologies sequencing. [PDF]

Microbiol Resour Announc
Tatsuke T.
europepmc   +1 more source

Characterisation and In Planta Activity of Bacteriophages That Infect the Key Bacterial Species Associated With Acute Oak Decline

Microbial Biotechnology, Volume 19, Issue 6, June 2026.
Phages that infect the oak pathogens Brenneria goodwinii and Gibbsiella quercinecans were isolated. The phages were able to effectively reduce bacterial populations of their respective hosts in vitro. However, when applied in planta, the phages did not reduce host populations and instead phages and bacteria co‐existed over time.
Emily R. Grace, Vanja Milenkovic, Katherine G. Hinton, Sabrine Dhaouadi, Diana Vinchira‐Villarraga, Michael A. Brockhurst, Mojgan Rabiey, Robert W. Jackson   +7 more
wiley   +1 more source

Full‐Length 16S and 18S rRNA Long‐Read Sequencing Reveals Gut Microbiome Diversity in the European Brown Hare (Lepus europaeus)

Environmental Microbiology Reports, Volume 18, Issue 3, June 2026.
Full‐length 16S and 18S rRNA Oxford Nanopore sequencing of large intestine contents from 30 healthy European brown hares revealed broad gut microbiome diversity. An 80% identity threshold detected substantially greater taxonomic richness than 95%, emphasizing the value of long‐read sequencing in wildlife microbiome research. ABSTRACT The European brown
Zbigniew Bełkot, Mateusz G. Adamski, Zuzanna J. Strzałkowska, Ewa D. Domańska, Daria Kłosińska, Grzegorz Kunstman, Dawid Skoczek, Joanna Pławińska‐Czarnak   +7 more
wiley   +1 more source

From short to long: The impact of read length on metagenome assembly and binning

Methods in Ecology and Evolution, Volume 17, Issue 6, Page 1788-1798, June 2026.
Abstract Metagenome sequencing not only plays a pivotal role in unravelling the genetic diversity and functional potential of microbial communities but also facilitates the discovery of genome context for microbial dark matter. This study presents a comparative analysis of metagenome sequencing strategies, focusing on the impact of read length on the ...
Xi Peng, Xingsheng Yang, Danrui Wang, Bo Zhao, Kai Feng, Qing He, Shang Wang, Ye Deng   +7 more
wiley   +1 more source

Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens. [PDF]

J Clin Microbiol
Bogaerts B, Van den Bossche A, Verhaegen B, Delbrassinne L, Mattheus W, Nouws S, Godfroid M, Hoffman S, Roosens NHC, De Keersmaecker SCJ, Vanneste K.   +10 more
europepmc   +1 more source