Results 131 to 140 of about 102,407 (197)

Crystal structures of a family 8 polysaccharide lyase reveal open and highly occluded substrate-binding cleft conformations

, 2011
Bacterial enzymatic degradation of glycosaminoglycans such as hyaluronan and chondroitin is facilitated by polysaccharide lyases. Family 8 polysaccharide lyase (PL8) enzymes contain at least two domains: one predominantly composed of ?-helices, the ...
Meng Zhang (154027), Johan P. Turkenberg (17252872), Nicola L. Smith (17252875), Zainab H. Elmabrouk (17252878), Florence Vincent (17252869), Simon J. Charnock (3714163), Gary W. Black (8892362), Edward Taylor (17168473)   +7 more
core   +2 more sources

Rhamnogalacturonan lyase reveals a unique fold and suggests a common polysaccharide lyase mechanism [PDF]

Acta Crystallographica Section A Foundations of Crystallography, 2002
M. A. McDonough, R. Kadirvelraj, P. Harris, J.-C. N. Poulsen, S. Larsen   +4 more
openaire   +1 more source

Untangling the Reaction Mechanism of the Polysaccharide Lyase PL42 Using QM/MM Metadynamics Simulations. [PDF]

J Chem Inf Model
Alonso-Gil S, Kondo T, Fushinobu S, Sánchez-Murcia PA.   +3 more
europepmc   +1 more source

Crystal structure of <i>Vibrio cholerae</i> polysaccharide lyase RbmB bound to <i>Vibrio</i> polysaccharide (VPS) fragments provides insights into substrate recognition and cleavage. [PDF]

Proc Natl Acad Sci U S A
Weerasekera R, Moreau A, Huang X, Potapova A, Schwechheimer C, Kandel R, Huynh Y, Cannizzo O, Gordon R, Gerace E, Hinbest AJ, Yang Y, Jiang X, Woods RJ, Yan J, Yildiz FH, Olson R.   +16 more
europepmc   +1 more source

Bacterial polysaccharide lyase family 33: Specificity from an evolutionarily conserved binding tunnel. [PDF]

Proc Natl Acad Sci U S A
Loiodice M, Drula E, McIver Z, Antonyuk S, Baslé A, Lima M, Yates EA, Byrne DP, Coughlan J, Leech A, Mesdaghi S, Rigden DJ, Drouillard S, Helbert W, Henrissat B, Terrapon N, Wright GSA, Couturier M, Cartmell A.   +18 more
europepmc   +1 more source

The human gut microbe Bacteroides thetaiotaomicron encodes the founding member of a novel glycosaminoglycan-degrading polysaccharide lyase family PL29. [PDF]

J Biol Chem, 2018
Ndeh D, Munoz Munoz J, Cartmell A, Bulmer D, Wills C, Henrissat B, Gray J.   +6 more
europepmc   +1 more source

Applying a polysaccharide lyase from Stenotrophomonas maltophilia to disrupt alginate exopolysaccharide produced by Pseudomonas aeruginosa clinical isolates. [PDF]

Appl Environ Microbiol
Felton SM, Akula N, Kolling GL, Azadi P, Black I, Kumar A, Heiss C, Capobianco J, Uknalis J, Papin JA, Berger BW.   +10 more
europepmc   +1 more source

The structure of a pectin-active family 1 polysaccharide lyase from the marine bacterium Pseudoalteromonas fuliginea. [PDF]

Acta Crystallogr F Struct Biol Commun
Hobbs JK, Boraston AB.
europepmc   +1 more source

Evolution and functional characterization of pectate lyase PEL12, a member of a highly expanded Clonostachys rosea polysaccharide lyase 1 family. [PDF]

BMC Microbiol, 2018
Atanasova L, Dubey M, Grujić M, Gudmundsson M, Lorenz C, Sandgren M, Kubicek CP, Jensen DF, Karlsson M.   +8 more
europepmc   +1 more source

Unraveling the diversity and functional potential of cyanosphere microbiomes assembled from terrestrial cyanobacteria. [PDF]

Appl Environ Microbiol
Palmer B, Couradeau EM, Johansen JR, Kurbessoian T, Carranza JO, Stajich JE, Ward R, Pietrasiak N.   +7 more
europepmc   +1 more source